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XSB1142 : prodynorphin [Rattus norvegicus]

[ CaMP Format ]

This entry is computationally expanded from SB0049

* Basic Information

OrganismRattus norvegicus (Norway rat)
Protein NamesProenkephalin-B; Beta-neoendorphin-dynorphin; Preprodynorphin; Alpha-neoendorphin; Beta-neoendorphin; Big dynorphin; Big Dyn; Dynorphin A(1-17); Dynorphin A; Dyn-A17; Dynorphin A(1-13); Dynorphin A(1-8); Leu-enkephalin; Rimorphin; Dynorphin B; Dyn-B; Dynorphin B(1-13); Leumorphin; Dynorphin B-29; prodynorphin; RecName: Full=Proenkephalin-B; AltName: Full=Beta-neoendorphin-dynorphin; AltName: Full=Preprodynorphin; Contains:RecName: Full=Alpha-neoendorphin; Contains:RecName: Full=Beta-neoendorphin; Contains:RecName: Full=Big dynorphin; Short=Big Dyn; Contains:RecName: Full=Dynorphin A; 1-17; 1-13; 1-8
Gene NamesPdyn
Gene LocusNot available
GO FunctionNot available
Entrez Protein Entrez Nucleotide Entrez Gene UniProt OMIM HGNC HPRD KEGG
AAA41118 N/A N/A P06300 N/A N/A N/A rno:

* Information From OMIM

Not Available.

* Structure Information

1. Primary Information

Length: 204 aa

Average Mass: 23.386 kDa

Monoisotopic Mass: 23.372 kDa

2. Domain Information

Annotated Domains: interpro / pfam / smart / prosite

Computationally Assigned Domains (Pfam+HMMER):

domain namebeginendscoree-value
Opiods_neuropep 1. 126-12.72
DUF2059 1. 75149-24.03.2

3. Sequence Information

Fasta Sequence: XSB1142.fasta

Amino Acid Sequence and Secondary Structures (PsiPred):

4. 3D Information

Not Available.

* Cleavage Information

2 [sites]

Cleavage sites (±10aa)

[Site 1] FLRRIRPKLK170-WDNQKRYGGF

Lys170 Trp

P10 P9 P8 P7 P6 P5 P4 P3 P2 P1
Phe161Leu162Arg163Arg164Ile165Arg166Pro167Lys168Leu169Lys170
P1' P2' P3' P4' P5' P6' P7' P8' P9' P10'
Trp171Asp172Asn173Gln174Lys175Arg176Tyr177Gly178Gly179Phe180

Sequence conservation (by blast)

[Site 2] LYKRYGGFLR163-RIRPKLKWDN

Arg163 Arg

P10 P9 P8 P7 P6 P5 P4 P3 P2 P1
Leu154Tyr155Lys156Arg157Tyr158Gly159Gly160Phe161Leu162Arg163
P1' P2' P3' P4' P5' P6' P7' P8' P9' P10'
Arg164Ile165Arg166Pro167Lys168Leu169Lys170Trp171Asp172Asn173

Sequence conservation (by blast)

* References

[PubMed ID: 3858883] Civelli O, Douglass J, Goldstein A, Herbert E, Sequence and expression of the rat prodynorphin gene. Proc Natl Acad Sci U S A. 1985 Jun;82(12):4291-5.