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XSB1144 : glutamate receptor, ionotropic, NMDA2A (epsilon 1) [Mus musculus]

[ CaMP Format ]

This entry is computationally expanded from SB0072

* Basic Information

OrganismMus musculus (house mouse)
Protein NamesGlutamate [NMDA] receptor subunit epsilon-1; N-methyl D-aspartate receptor subtype 2A; NMDAR2A; NR2A; glutamate receptor; ionotropic; NMDA2A (epsilon 1); GluRepsilon1
Gene NamesGrin2a; glutamate receptor, ionotropic, NMDA2A (epsilon 1)
Gene Locus16 3.4 cM; chromosome 16
GO FunctionNot available
Entrez Protein Entrez Nucleotide Entrez Gene UniProt OMIM HGNC HPRD KEGG
NP_032196 NM_008170 14811 P35436 N/A N/A N/A mmu:14811

* Information From OMIM

Not Available.

* Structure Information

1. Primary Information

Length: 1464 aa

Average Mass: 165.421 kDa

Monoisotopic Mass: 165.316 kDa

2. Domain Information

Annotated Domains: interpro / pfam / smart / prosite

Computationally Assigned Domains (Pfam+HMMER):

domain namebeginendscoree-value
HS1_rep 1. 1792156.73.1
Lig_chan-Glu_bd 1. 43950280.65.5e-21
Lig_chan 1. 554838375.49.9e-110
NMDAR2_C 1. 83914641166.20
--- cleavage 1329 (inside NMDAR2_C 839..1464) ---
--- cleavage 1278 (inside NMDAR2_C 839..1464) ---

3. Sequence Information

Fasta Sequence: XSB1144.fasta

Amino Acid Sequence and Secondary Structures (PsiPred):

4. 3D Information

Not Available.

* Cleavage Information

2 [sites]

Cleavage sites (±10aa)

[Site 1] LEGNLYGSLF1329-SVPSSKLLGN

Phe1329 Ser

P10 P9 P8 P7 P6 P5 P4 P3 P2 P1
Leu1320Glu1321Gly1322Asn1323Leu1324Tyr1325Gly1326Ser1327Leu1328Phe1329
P1' P2' P3' P4' P5' P6' P7' P8' P9' P10'
Ser1330Val1331Pro1332Ser1333Ser1334Lys1335Leu1336Leu1337Gly1338Asn1339

Sequence conservation (by blast)

[Site 2] QDWSQNNALQ1278-FQKNKLKINR

Gln1278 Phe

P10 P9 P8 P7 P6 P5 P4 P3 P2 P1
Gln1269Asp1270Trp1271Ser1272Gln1273Asn1274Asn1275Ala1276Leu1277Gln1278
P1' P2' P3' P4' P5' P6' P7' P8' P9' P10'
Phe1279Gln1280Lys1281Asn1282Lys1283Leu1284Lys1285Ile1286Asn1287Arg1288

Sequence conservation (by blast)

* References

[PubMed ID: 19276107] Cho KK, Khibnik L, Philpot BD, Bear MF, The ratio of NR2A/B NMDA receptor subunits determines the qualities of ocular dominance plasticity in visual cortex. Proc Natl Acad Sci U S A. 2009 Mar 31;106(13):5377-82. Epub 2009 Mar 10.

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