logo CaMPDB: Calpain for Modulatory Proteolysis Database

XSB1267 : PREDICTED: similar to beta actin isoform 2 [Monodelphis domestica]

[ CaMP Format ]

This entry is computationally expanded from SB0031

* Basic Information

OrganismMonodelphis domestica (gray short-tailed opossum)
Protein Namessimilar to beta actin isoform 2
Gene NamesLOC100011313; Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 3 ESTs, 63 Proteins
Gene LocusNot available
GO FunctionNot available
Entrez Protein Entrez Nucleotide Entrez Gene UniProt OMIM HGNC HPRD KEGG
XP_001362988 XM_001362951 100011313 N/A N/A N/A N/A N/A

* Information From OMIM

Not Available.

* Structure Information

1. Primary Information

Length: 376 aa

Average Mass: 41.996 kDa

Monoisotopic Mass: 41.969 kDa

2. Domain Information

Annotated Domains: Not Available.

Computationally Assigned Domains (Pfam+HMMER):

domain namebeginendscoree-value
Actin 1. 6376819.91.6e-243
--- cleavage 38 (inside Actin 6..376) ---

3. Sequence Information

Fasta Sequence: XSB1267.fasta

Amino Acid Sequence and Secondary Structures (PsiPred):

4. 3D Information

Not Available.

* Cleavage Information

1 [sites]

Cleavage sites (±10aa)

[Site 1] RAVFPSIVGR38-PRHQGVMVGM

Arg38 Pro

P10 P9 P8 P7 P6 P5 P4 P3 P2 P1
Arg29Ala30Val31Phe32Pro33Ser34Ile35Val36Gly37Arg38
P1' P2' P3' P4' P5' P6' P7' P8' P9' P10'
Pro39Arg40His41Gln42Gly43Val44Met45Val46Gly47Met48

Sequence conservation (by blast)

* References

None.