logo CaMPDB: Calpain for Modulatory Proteolysis Database

XSB1373 : actin [Nuclearia simplex]

[ CaMP Format ]

This entry is computationally expanded from SB0031

* Basic Information

OrganismNuclearia simplex
Protein Namesactin
Gene NamesNot available
Gene LocusNot available
GO FunctionNot available
Entrez Protein Entrez Nucleotide Entrez Gene UniProt OMIM HGNC HPRD KEGG
AAQ75373 N/A N/A Q6JUF2 N/A N/A N/A N/A

* Information From OMIM

Not Available.

* Structure Information

1. Primary Information

Length: 375 aa

Average Mass: 0.000 kDa

Monoisotopic Mass: 0.000 kDa

2. Domain Information

Annotated Domains: interpro / pfam / smart / prosite

Computationally Assigned Domains (Pfam+HMMER):

domain namebeginendscoree-value
Actin 1. 2375812.03.8e-241
--- cleavage 37 (inside Actin 2..375) ---

3. Sequence Information

Fasta Sequence: XSB1373.fasta

Amino Acid Sequence and Secondary Structures (PsiPred):

4. 3D Information

Not Available.

* Cleavage Information

1 [sites]

Cleavage sites (±10aa)

[Site 1] RAVFPSIVGR37-PRHQGVMVGM

Arg37 Pro

P10 P9 P8 P7 P6 P5 P4 P3 P2 P1
Arg28Ala29Val30Phe31Pro32Ser33Ile34Val35Gly36Arg37
P1' P2' P3' P4' P5' P6' P7' P8' P9' P10'
Pro38Arg39His40Gln41Gly42Val43Met44Val45Gly46Met47

Sequence conservation (by blast)

* References

[PubMed ID: 15148395] Nikolaev SI, Berney C, Fahrni JF, Bolivar I, Polet S, Mylnikov AP, Aleshin VV, Petrov NB, Pawlowski J, The twilight of Heliozoa and rise of Rhizaria, an emerging supergroup of amoeboid eukaryotes. Proc Natl Acad Sci U S A. 2004 May 25;101(21):8066-71. Epub 2004 May 17.