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XSB1399 : actin [Cryptococcus neoformans var. neoformans JEC21]

[ CaMP Format ]

This entry is computationally expanded from SB0031

* Basic Information

OrganismCryptococcus neoformans var. neoformans JEC21 (Filobasidiella neoformans var. neoformans strain JEC21)
Protein NamesActin; Putative uncharacterized protein
Gene NamesCNA04650, CNBA4460
Gene LocusNot available
GO FunctionGO:0005200 - structural constituent of cytoskeleton
Entrez Protein Entrez Nucleotide Entrez Gene UniProt OMIM HGNC HPRD KEGG
XP_566845 XM_566845 3253304 Q5KP06 N/A N/A N/A cne:CNA04650

* Information From OMIM

Not Available.

* Structure Information

1. Primary Information

Length: 377 aa

Average Mass: 42.049 kDa

Monoisotopic Mass: 42.022 kDa

2. Domain Information

Annotated Domains: interpro / pfam / smart / prosite

Computationally Assigned Domains (Pfam+HMMER):

domain namebeginendscoree-value
Actin 1. 4377801.46e-238
--- cleavage 39 (inside Actin 4..377) ---

3. Sequence Information

Fasta Sequence: XSB1399.fasta

Amino Acid Sequence and Secondary Structures (PsiPred):

4. 3D Information

Not Available.

* Cleavage Information

1 [sites]

Cleavage sites (±10aa)

[Site 1] RAVFPSIVGR39-PRHQGVMVGM

Arg39 Pro

P10 P9 P8 P7 P6 P5 P4 P3 P2 P1
Arg30Ala31Val32Phe33Pro34Ser35Ile36Val37Gly38Arg39
P1' P2' P3' P4' P5' P6' P7' P8' P9' P10'
Pro40Arg41His42Gln43Gly44Val45Met46Val47Gly48Met49

Sequence conservation (by blast)

* References

[PubMed ID: 15653466] Loftus BJ, Fung E, Roncaglia P, Rowley D, Amedeo P, Bruno D, Vamathevan J, Miranda M, Anderson IJ, Fraser JA, Allen JE, Bosdet IE, Brent MR, Chiu R, Doering TL, Donlin MJ, D'Souza CA, Fox DS, Grinberg V, Fu J, Fukushima M, Haas BJ, Huang JC, Janbon G, Jones SJ, Koo HL, Krzywinski MI, Kwon-Chung JK, Lengeler KB, Maiti R, Marra MA, Marra RE, Mathewson CA, Mitchell TG, Pertea M, Riggs FR, Salzberg SL, Schein JE, Shvartsbeyn A, Shin H, Shumway M, Specht CA, Suh BB, Tenney A, Utterback TR, Wickes BL, Wortman JR, Wye NH, Kronstad JW, Lodge JK, Heitman J, Davis RW, Fraser CM, Hyman RW, The genome of the basidiomycetous yeast and human pathogen Cryptococcus neoformans. Science. 2005 Feb 25;307(5713):1321-4. Epub 2005 Jan 13.