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XSB1409 : actin [Debaryomyces hansenii]

[ CaMP Format ]

This entry is computationally expanded from SB0031

* Basic Information

OrganismDebaryomyces hansenii
Protein Namesactin
Gene NamesACT1
Gene LocusNot available
GO FunctionNot available
Entrez Protein Entrez Nucleotide Entrez Gene UniProt OMIM HGNC HPRD KEGG
BAC55128 N/A N/A Q876Z3 N/A N/A N/A N/A

* Information From OMIM

Not Available.

* Structure Information

1. Primary Information

Length: 340 aa

Average Mass: 37.598 kDa

Monoisotopic Mass: 37.574 kDa

2. Domain Information

Annotated Domains: interpro / pfam / smart / prosite

Computationally Assigned Domains (Pfam+HMMER):

domain namebeginendscoree-value
Actin 1. 1340623.52.1e-184
--- cleavage 33 (inside Actin 1..340) ---

3. Sequence Information

Fasta Sequence: XSB1409.fasta

Amino Acid Sequence and Secondary Structures (PsiPred):

4. 3D Information

Not Available.

* Cleavage Information

1 [sites]

Cleavage sites (±10aa)

[Site 1] RAVFPSIVGR33-PRHQGIMVGM

Arg33 Pro

P10 P9 P8 P7 P6 P5 P4 P3 P2 P1
Arg24Ala25Val26Phe27Pro28Ser29Ile30Val31Gly32Arg33
P1' P2' P3' P4' P5' P6' P7' P8' P9' P10'
Pro34Arg35His36Gln37Gly38Ile39Met40Val41Gly42Met43

Sequence conservation (by blast)

* References

[PubMed ID: 15321668] Fukuda K, Jin-Shan C, Kawano M, Sudo K, Gunge N, Stress responses of linear plasmids from Debaryomyces hansenii. FEMS Microbiol Lett. 2004 Aug 15;237(2):243-8.