logo CaMPDB: Calpain for Modulatory Proteolysis Database

XSB1422 : ubiquitin/actin fusion protein 2 [Lotharella amoeboformis]

[ CaMP Format ]

This entry is computationally expanded from SB0031

* Basic Information

OrganismLotharella amoeboformis
Protein Namesubiquitin/actin fusion protein 2
Gene NamesNot available
Gene LocusNot available
GO FunctionNot available
Entrez Protein Entrez Nucleotide Entrez Gene UniProt OMIM HGNC HPRD KEGG
AAP34629 N/A N/A Q7XB24 N/A N/A N/A N/A

* Information From OMIM

Not Available.

* Structure Information

1. Primary Information

Length: 235 aa

Average Mass: 25.990 kDa

Monoisotopic Mass: 25.974 kDa

2. Domain Information

Annotated Domains: interpro / pfam / smart / prosite

Computationally Assigned Domains (Pfam+HMMER):

domain namebeginendscoree-value
ubiquitin 1. 167124.43.7e-34
Actin 1. 7523526.85.3e-16
--- cleavage 110 (inside Actin 75..235) ---

3. Sequence Information

Fasta Sequence: XSB1422.fasta

Amino Acid Sequence and Secondary Structures (PsiPred):

4. 3D Information

Not Available.

* Cleavage Information

1 [sites]

Cleavage sites (±10aa)

[Site 1] RAVFPSIVGR110-PRHQGVMVGM

Arg110 Pro

P10 P9 P8 P7 P6 P5 P4 P3 P2 P1
Arg101Ala102Val103Phe104Pro105Ser106Ile107Val108Gly109Arg110
P1' P2' P3' P4' P5' P6' P7' P8' P9' P10'
Pro111Arg112His113Gln114Gly115Val116Met117Val118Gly119Met120

Sequence conservation (by blast)

* References

[PubMed ID: 12729753] Archibald JM, Teh EM, Keeling PJ, Novel ubiquitin fusion proteins: ribosomal protein P1 and actin. J Mol Biol. 2003 May 9;328(4):771-8.