logo CaMPDB: Calpain for Modulatory Proteolysis Database

XSB1456 : actin [Mayorella sp. JJP-2003]

[ CaMP Format ]

This entry is computationally expanded from SB0031

* Basic Information

OrganismMayorella sp. JJP-2003
Protein Namesactin
Gene NamesNot available
Gene LocusNot available
GO FunctionNot available
Entrez Protein Entrez Nucleotide Entrez Gene UniProt OMIM HGNC HPRD KEGG
AAQ55799 N/A N/A Q6WE54 N/A N/A N/A N/A

* Information From OMIM

Not Available.

* Structure Information

1. Primary Information

Length: 369 aa

Average Mass: 40.963 kDa

Monoisotopic Mass: 40.936 kDa

2. Domain Information

Annotated Domains: interpro / pfam / smart / prosite

Computationally Assigned Domains (Pfam+HMMER):

domain namebeginendscoree-value
Actin 1. 4369791.36.4e-235
--- cleavage 39 (inside Actin 4..369) ---

3. Sequence Information

Fasta Sequence: XSB1456.fasta

Amino Acid Sequence and Secondary Structures (PsiPred):

4. 3D Information

Not Available.

* Cleavage Information

1 [sites]

Cleavage sites (±10aa)

[Site 1] RAVFPSIVGR39-PRHTGVMVGM

Arg39 Pro

P10 P9 P8 P7 P6 P5 P4 P3 P2 P1
Arg30Ala31Val32Phe33Pro34Ser35Ile36Val37Gly38Arg39
P1' P2' P3' P4' P5' P6' P7' P8' P9' P10'
Pro40Arg41His42Thr43Gly44Val45Met46Val47Gly48Met49

Sequence conservation (by blast)

* References

[PubMed ID: 12949141] Fahrni JF, Bolivar I, Berney C, Nassonova E, Smirnov A, Pawlowski J, Phylogeny of lobose amoebae based on actin and small-subunit ribosomal RNA genes. Mol Biol Evol. 2003 Nov;20(11):1881-6. Epub 2003 Aug 29.

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