logo CaMPDB: Calpain for Modulatory Proteolysis Database

XSB1493 : PREDICTED: similar to actin alpha 1 skeletal muscle protein isoform 1 [Pan troglodytes]

[ CaMP Format ]

This entry is computationally expanded from SB0071

* Basic Information

OrganismPan troglodytes (chimpanzee)
Protein Namessimilar to actin alpha 1 skeletal muscle protein isoform 1
Gene NamesLOC466148; Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 869 ESTs, 52 Proteins
Gene LocusNot available
GO FunctionNot available
Entrez Protein Entrez Nucleotide Entrez Gene UniProt OMIM HGNC HPRD KEGG
XP_001141197 XM_001141197 466148 N/A N/A N/A N/A N/A

* Information From OMIM

Not Available.

* Structure Information

1. Primary Information

Length: 262 aa

Average Mass: 29.069 kDa

Monoisotopic Mass: 29.050 kDa

2. Domain Information

Annotated Domains: Not Available.

Computationally Assigned Domains (Pfam+HMMER):

domain namebeginendscoree-value
Actin 1. 4262434.12.2e-127
--- cleavage 39 (inside Actin 4..262) ---

3. Sequence Information

Fasta Sequence: XSB1493.fasta

Amino Acid Sequence and Secondary Structures (PsiPred):

4. 3D Information

Not Available.

* Cleavage Information

1 [sites]

Cleavage sites (±10aa)

[Site 1] RAVFPSIVGR39-PRHQGVMVGM

Arg39 Pro

P10 P9 P8 P7 P6 P5 P4 P3 P2 P1
Arg30Ala31Val32Phe33Pro34Ser35Ile36Val37Gly38Arg39
P1' P2' P3' P4' P5' P6' P7' P8' P9' P10'
Pro40Arg41His42Gln43Gly44Val45Met46Val47Gly48Met49

Sequence conservation (by blast)

* References

None.