logo CaMPDB: Calpain for Modulatory Proteolysis Database

XSB1497 : smooth muscle alpha actin [Xenopus laevis]

[ CaMP Format ]

This entry is computationally expanded from SB0071

* Basic Information

OrganismXenopus laevis (African clawed frog)
Protein Namessmooth muscle alpha actin
Gene NamesNot available
Gene LocusNot available
GO FunctionNot available
Entrez Protein Entrez Nucleotide Entrez Gene UniProt OMIM HGNC HPRD KEGG
AAX85448 N/A N/A Q52QH5 N/A N/A N/A xla:

* Information From OMIM

Not Available.

* Structure Information

1. Primary Information

Length: 377 aa

Average Mass: 41.906 kDa

Monoisotopic Mass: 41.879 kDa

2. Domain Information

Annotated Domains: interpro / pfam / smart / prosite

Computationally Assigned Domains (Pfam+HMMER):

domain namebeginendscoree-value
Actin 1. 4377829.22.4e-246
--- cleavage 39 (inside Actin 4..377) ---

3. Sequence Information

Fasta Sequence: XSB1497.fasta

Amino Acid Sequence and Secondary Structures (PsiPred):

4. 3D Information

Not Available.

* Cleavage Information

1 [sites]

Cleavage sites (±10aa)

[Site 1] RAVFPSIVGR39-PRHQGVMVGM

Arg39 Pro

P10 P9 P8 P7 P6 P5 P4 P3 P2 P1
Arg30Ala31Val32Phe33Pro34Ser35Ile36Val37Gly38Arg39
P1' P2' P3' P4' P5' P6' P7' P8' P9' P10'
Pro40Arg41His42Gln43Gly44Val45Met46Val47Gly48Met49

Sequence conservation (by blast)

* References

[PubMed ID: 15965984] Warkman AS, Zheng L, Qadir MA, Atkinson BG, Organization and developmental expression of an amphibian vascular smooth muscle alpha-actin gene. Dev Dyn. 2005 Aug;233(4):1546-53.