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XSB1543 : cytoskeletal actin CyIIIb [Strongylocentrotus purpuratus]

[ CaMP Format ]

This entry is computationally expanded from SB0031

* Basic Information

OrganismStrongylocentrotus purpuratus
Protein NamesActin, cytoskeletal 3B; Actin, cytoskeletal IIIB; cytoskeletal actin CyIIIb
Gene NamesCyIIIb; CYIIIB; cytoskeletal actin CyIIIb
Gene LocusNot available
GO FunctionNot available
Entrez Protein Entrez Nucleotide Entrez Gene UniProt OMIM HGNC HPRD KEGG
NP_999692 NM_214527 373296 P18499 N/A N/A N/A spu:373296

* Information From OMIM

Not Available.

* Structure Information

1. Primary Information

Length: 376 aa

Average Mass: 41.832 kDa

Monoisotopic Mass: 41.805 kDa

2. Domain Information

Annotated Domains: interpro / pfam / smart / prosite

Computationally Assigned Domains (Pfam+HMMER):

domain namebeginendscoree-value
Actin 1. 3376809.62e-240
--- cleavage 38 (inside Actin 3..376) ---

3. Sequence Information

Fasta Sequence: XSB1543.fasta

Amino Acid Sequence and Secondary Structures (PsiPred):

4. 3D Information

Not Available.

* Cleavage Information

1 [sites]

Cleavage sites (±10aa)

[Site 1] RAVFPSIVGR38-PRHQGVMVGM

Arg38 Pro

P10 P9 P8 P7 P6 P5 P4 P3 P2 P1
Arg29Ala30Val31Phe32Pro33Ser34Ile35Val36Gly37Arg38
P1' P2' P3' P4' P5' P6' P7' P8' P9' P10'
Pro39Arg40His41Gln42Gly43Val44Met45Val46Gly47Met48

Sequence conservation (by blast)

* References

[PubMed ID: 3148745] Durica DS, Garza D, Restrepo MA, Hryniewicz MM, DNA sequence analysis and structural relationships among the cytoskeletal actin genes of the sea urchin Strongylocentrotus purpuratus. J Mol Evol. 1988 Dec-1989 Feb;28(1-2):72-86.

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