XSB1621 : calcium release channel [Sus scrofa]
[ CaMP Format ]
This entry is computationally expanded from SB0087
* Basic Information
| Organism | Sus scrofa (pig) |
| Protein Names | Ryanodine receptor 1; RYR-1; RyR1; Skeletal muscle-type ryanodine receptor; Skeletal muscle calcium release channel; calcium release channel |
| Gene Names | CRC (ryr1); CRC |
| Gene Locus | Not available |
| GO Function | Not available |
* Information From OMIM
Not Available.
* Structure Information
1. Primary Information
Length: 5034 aa
Average Mass: 565.201 kDa
Monoisotopic Mass: 564.840 kDa
2. Domain Information
Annotated Domains: interpro / pfam / smart / prosite
Computationally Assigned Domains (Pfam+HMMER):
| domain name | begin | end | score | e-value |
|---|---|---|---|---|
| Ins145_P3_rec 1. | 8 | 210 | 356.6 | 4.6e-104 |
| MIR 1. | 211 | 390 | 270.7 | 3.4e-78 |
| RYDR_ITPR 1. | 439 | 643 | 332.9 | 6.3e-97 |
| SPRY 1. | 658 | 796 | 135.5 | 1.7e-37 |
| RyR 1. | 849 | 943 | 222.5 | 1.1e-63 |
| RyR 2. | 963 | 1057 | 212.3 | 1.3e-60 |
| SPRY 2. | 1084 | 1207 | 160.5 | 4.9e-45 |
| SPRY 3. | 1429 | 1569 | 153.8 | 5.2e-43 |
| RNA_polI_A34 1. | 1770 | 1925 | -77.2 | 5.7 |
| RIIa 1. | 1937 | 1974 | -8.8 | 6.8 |
| PRA-PH 1. | 2053 | 2126 | -46.7 | 2.8 |
| RYDR_ITPR 2. | 2157 | 2365 | 306.7 | 5e-89 |
| RyR 3. | 2734 | 2828 | 217.2 | 4.2e-62 |
| RyR 4. | 2854 | 2942 | 184.4 | 3.2e-52 |
| Hpt 1. | 3090 | 3164 | -9.0 | 6 |
| Transposase_12 1. | 3326 | 3386 | -55.4 | 2.9 |
| XPA_C 1. | 3523 | 3568 | -8.6 | 9.7 |
| GvpG 1. | 3693 | 3769 | -24.4 | 3.6 |
| HTH_DeoR 1. | 3807 | 3856 | -17.5 | 5.4 |
| RIH_assoc 1. | 3865 | 3998 | 326.0 | 7.8e-95 |
| CHCH 1. | 4093 | 4132 | -5.0 | 6.1 |
| HR1 1. | 4182 | 4255 | -11.4 | 2.3 |
| CoatB 1. | 4265 | 4312 | -9.1 | 7.3 |
| RR_TM4-6 1. | 4377 | 4667 | 418.8 | 9e-123 |
| Ion_trans 1. | 4758 | 4933 | 36.2 | 1.4e-07 |
| zf-C2H2 1. | 4953 | 4980 | 1.3 | 8.8 |
3. Sequence Information
Fasta Sequence: XSB1621.fasta
Amino Acid Sequence and Secondary Structures (PsiPred):
4. 3D Information
Not Available.
* Cleavage Information
* References
[PubMed ID: 1329581] Harbitz I, Kristensen T, Bosnes M, Kran S, Davies W, DNA sequence of the skeletal muscle calcium release channel cDNA and verification of the Arg615----Cys615 mutation, associated with porcine malignant hyperthermia, in Norwegian landrace pigs. Anim Genet. 1992;23(5):395-402.