logo CaMPDB: Calpain for Modulatory Proteolysis Database

XSB1805 : RecName: Full=Actin-1

[ CaMP Format ]

This entry is computationally expanded from SB0071

* Basic Information

OrganismDaucus carota (carrot)
Protein NamesActin-1
Gene NamesNot available
Gene LocusNot available
GO FunctionNot available
Entrez Protein Entrez Nucleotide Entrez Gene UniProt OMIM HGNC HPRD KEGG
P23343 N/A N/A P23343 N/A N/A N/A N/A

* Information From OMIM

Not Available.

* Structure Information

1. Primary Information

Length: 380 aa

Average Mass: 41.988 kDa

Monoisotopic Mass: 41.961 kDa

2. Domain Information

Annotated Domains: interpro / pfam / smart / prosite

Computationally Assigned Domains (Pfam+HMMER):

domain namebeginendscoree-value
Actin 1. 4377735.54.1e-218
--- cleavage 39 (inside Actin 4..377) ---

3. Sequence Information

Fasta Sequence: XSB1805.fasta

Amino Acid Sequence and Secondary Structures (PsiPred):

4. 3D Information

Not Available.

* Cleavage Information

1 [sites]

Cleavage sites (±10aa)

[Site 1] RAVFPSIVGR39-PRHTGVMVGM

Arg39 Pro

P10 P9 P8 P7 P6 P5 P4 P3 P2 P1
Arg30Ala31Val32Phe33Pro34Ser35Ile36Val37Gly38Arg39
P1' P2' P3' P4' P5' P6' P7' P8' P9' P10'
Pro40Arg41His42Thr43Gly44Val45Met46Val47Gly48Met49

Sequence conservation (by blast)

* References

[PubMed ID: 2491662] Stranathan M, Hastings C, Trinh H, Zimmerman JL, Molecular evolution of two actin genes from carrot. Plant Mol Biol. 1989 Oct;13(4):375-83.