XSB1833 : PREDICTED: similar to spectrin alpha 2 isoform 1 [Monodelphis domestica]
[ CaMP Format ]
This entry is computationally expanded from SB0061
* Basic Information
| Organism | Monodelphis domestica (gray short-tailed opossum) |
| Protein Names | similar to spectrin alpha 2 isoform 1 |
| Gene Names | LOC100011839; Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs, 2 Proteins |
| Gene Locus | Not available |
| GO Function | Not available |
* Information From OMIM
Not Available.
* Structure Information
1. Primary Information
Length: 2478 aa
Average Mass: 285.696 kDa
Monoisotopic Mass: 285.520 kDa
2. Domain Information
Annotated Domains: Not Available.
Computationally Assigned Domains (Pfam+HMMER):
| domain name | begin | end | score | e-value |
| Spectrin 1. | 44 | 147 | 128.3 | 2.5e-35 |
| Spectrin 2. | 149 | 253 | 138.6 | 1.9e-38 |
| Spectrin 3. | 255 | 359 | 137.4 | 4.5e-38 |
| Spectrin 4. | 361 | 465 | 114.9 | 2.8e-31 |
| Spectrin 5. | 467 | 571 | 127.0 | 5.9e-35 |
| Spectrin 6. | 573 | 676 | 125.4 | 1.9e-34 |
| Spectrin 7. | 678 | 782 | 145.0 | 2.4e-40 |
| Spectrin 8. | 784 | 888 | 155.0 | 2.3e-43 |
| SH3_1 1. | 970 | 1024 | 78.9 | 1.8e-20 |
| Spectrin 9. | 1071 | 1211 | 71.2 | 3.9e-18 |
| --- cleavage 1156 (inside Spectrin 1071..1211) --- |
| Spectrin 10. | 1213 | 1317 | 147.6 | 3.8e-41 |
| Spectrin 11. | 1319 | 1423 | 120.5 | 5.7e-33 |
| Spectrin 12. | 1425 | 1529 | 122.1 | 1.9e-33 |
| Spectrin 13. | 1531 | 1641 | 86.0 | 1.3e-22 |
| Spectrin 14. | 1643 | 1747 | 133.8 | 5.6e-37 |
| Spectrin 15. | 1749 | 1853 | 149.5 | 9.9e-42 |
| Spectrin 16. | 1855 | 1959 | 130.7 | 4.8e-36 |
| Spectrin 17. | 1961 | 2066 | 119.5 | 1.1e-32 |
| Spectrin 18. | 2076 | 2180 | 72.2 | 1.9e-18 |
| Spectrin 19. | 2190 | 2316 | 44.1 | 5.4e-10 |
| efhand 1. | 2333 | 2361 | 36.5 | 1e-07 |
| efhand 2. | 2376 | 2404 | 23.4 | 0.00096 |
| efhand_Ca_insen 1. | 2408 | 2477 | 45.6 | 1.9e-10 |
3. Sequence Information
Fasta Sequence: XSB1833.fasta
Amino Acid Sequence and Secondary Structures (PsiPred):
4. 3D Information
Not Available.
* Cleavage Information
1 [sites]
Cleavage sites (±10aa)
[Site 1] VQAVQQQEVY1156-GMMPRDDTDS
Tyr1156 
Gly
 |
| P10 | P9 | P8 | P7 | P6 |
P5 | P4 | P3 | P2 | P1 |
| Val1147 | Gln1148 | Ala1149 | Val1150 | Gln1151 | Gln1152 | Gln1153 | Glu1154 | Val1155 | Tyr1156 |
 |
| P1' | P2' | P3' | P4' | P5' |
P6' | P7' | P8' | P9' | P10' |
| Gly1157 | Met1158 | Met1159 | Pro1160 | Arg1161 | Asp1162 | Asp1163 | Thr1164 | Asp1165 | Ser1166 |
Sequence conservation (by blast)
Sequence conservation (by blast)
| Reference peptide (cleaved bond±30 residues) |
|---|
|
LKDINKVAEDLESEGLMAEEVQAVQQQEVYGMMPRDDTDSKTASPWKSARLMVHTVATFN
|
Summary
| # |
organism |
max score |
hits |
top seq |
| 1 |
Monodelphis domestica |
95.90 |
2 |
PREDICTED: similar to spectrin alpha 2 isoform 1 |
| 2 |
Canis familiaris |
95.90 |
1 |
PREDICTED: similar to Spectrin alpha chain, brain |
| 3 |
Homo sapiens |
94.40 |
16 |
alpha II spectrin |
| 4 |
N/A |
94.40 |
4 |
- |
| 5 |
Rattus norvegicus |
92.40 |
3 |
SPTA2_RAT Spectrin alpha chain, brain (Spectrin, n |
| 6 |
Bos taurus |
90.50 |
2 |
PREDICTED: similar to SPTAN1 protein isoform 2 |
| 7 |
Mus musculus |
90.10 |
19 |
spectrin alpha 2 |
| 8 |
Gallus gallus |
90.10 |
3 |
spectrin, alpha, non-erythrocytic 1 (alpha-fodrin) |
| 9 |
Xenopus tropicalis |
65.50 |
1 |
hypothetical protein LOC100036647 |
| 10 |
Tetraodon nigroviridis |
57.00 |
2 |
unnamed protein product |
| 11 |
Danio rerio |
56.20 |
1 |
alpha II-spectrin |
Top-ranked sequences
| organism | matching |
|---|
| Monodelphis domestica |
Query 1127 LKDINKVAEDLESEGLMXXXXXXXXXXXXY#GMMPRDDTDSKTASPWKSARLMVHTVATFN 1186
||||||||||||||||| |#||||||||||||||||||||||||||||||
Sbjct 1127 LKDINKVAEDLESEGLMAEEVQAVQQQEVY#GMMPRDDTDSKTASPWKSARLMVHTVATFN 1186
|
| Canis familiaris |
Query 1127 LKDINKVAEDLESEGLMXXXXXXXXXXXXY#GMMPRDDTDSKTASPWKSARLMVHTVATFN 1186
||||||||||||||||| |#||||||||||||||||||||||||||||||
Sbjct 1243 LKDINKVAEDLESEGLMAEEVQAVQQQEVY#GMMPRDDTDSKTASPWKSARLMVHTVATFN 1302
|
| Homo sapiens |
Query 1127 LKDINKVAEDLESEGLMXXXXXXXXXXXXY#GMMPRDDTDSKTASPWKSARLMVHTVATFN 1186
||||||||||||||||| |#||||||+|||||||||||||||||||||||
Sbjct 1147 LKDINKVAEDLESEGLMAEEVQAVQQQEVY#GMMPRDETDSKTASPWKSARLMVHTVATFN 1206
|
| N/A |
Query 1127 LKDINKVAEDLESEGLMXXXXXXXXXXXXY#GMMPRDDTDSKTASPWKSARLMVHTVATFN 1186
||||||||||||||||| |#||||||+|||||||||||||||||||||||
Sbjct 472 LKDINKVAEDLESEGLMAEEVQAVQQQEVY#GMMPRDETDSKTASPWKSARLMVHTVATFN 531
|
| Rattus norvegicus |
Query 1127 LKDINKVAEDLESEGLMXXXXXXXXXXXXY#GMMPRDDTDSKTASPWKSARLMVHTVATFN 1186
||||||||||||||||| |#||||||+ ||||||||||||||||||||||
Sbjct 1147 LKDINKVAEDLESEGLMAEEVQAVQQQEVY#GMMPRDEADSKTASPWKSARLMVHTVATFN 1206
|
| Bos taurus |
Query 1127 LKDINKVAEDLESEGLMXXXXXXXXXXXXY#GMMPRDDTDSKTASPWKSARLMVHTVATFN 1186
||||||||||||||||| |#| ||||++||||||||||||||||||||||
Sbjct 1147 LKDINKVAEDLESEGLMAEEVQAVQQQEVY#GAMPRDESDSKTASPWKSARLMVHTVATFN 1206
|
| Mus musculus |
Query 1127 LKDINKVAEDLESEGLMXXXXXXXXXXXXY#GMMPRDDTDSKTASPWKSARLMVHTVATFN 1186
||||||||||||||||| |#| ||||+ ||||||||||||||||||||||
Sbjct 1127 LKDINKVAEDLESEGLMAEEVQAVQQQEVY#GAMPRDEADSKTASPWKSARLMVHTVATFN 1186
|
| Gallus gallus |
Query 1127 LKDINKVAEDLESEGLMXXXXXXXXXXXXY#GMMPRDDTDSKTASPWKSARLMVHTVATFN 1186
|||||||| |||||||| |#||||||+||||| |||||||+|||||||||
Sbjct 1147 LKDINKVANDLESEGLMAEEVQAVEHQEVY#GMMPRDETDSKTVSPWKSARMMVHTVATFN 1206
|
| Xenopus tropicalis |
Query 1127 LKDINKVAEDLESEGLMXXXXXXXXXXXXY#GMMPRDDTDSKTASPWKSARLMVHTVATFN 1186
||||||||++||||||+ |#|| ||+ |||+|||||| | | |||||
Sbjct 1147 LKDINKVADELESEGLITEEVQPVQHQEVY#GMQ-RDEADSKSASPWKSVRTAVLAVATFN 1205
|
| Tetraodon nigroviridis |
Query 1127 LKDINKVAEDLESEGLMXXXXXXXXXXXXY#GMMP----RDDTDSKTASPWKSARLMVHTV 1182
|+|||||| +||||||| # ++ +|+ |||||||||+ || | |
Sbjct 1267 LRDINKVAAELESEGLMAEETPMVQAQQQQ#ELLGAAPGKDEADSKTASPWKNVRLAVQTT 1326
Query 1183 ATFN 1186
| ||
Sbjct 1327 ANFN 1330
|
| Danio rerio |
Query 1127 LKDINKVAEDLESEGLMXXXXXXXXXXXX--Y#GMMP-RDDTDSKTASPWKSARLMVHTVA 1183
|+|||||| +||||||| #| | +|+ ||| |||||| || | | |
Sbjct 1147 LRDINKVASELESEGLMAEEAPVVQAQQVEVL#GSAPGKDEADSKGASPWKSVRLAVQTTA 1206
Query 1184 TFN 1186
||
Sbjct 1207 NFN 1209
|
