XSB1903 : PREDICTED: protein tyrosine phosphatase, receptor type, N [Pan troglodytes]
[ CaMP Format ]
This entry is computationally expanded from SB0024
* Basic Information
| Organism | Pan troglodytes (chimpanzee) |
| Protein Names | protein tyrosine phosphatase; receptor type; N |
| Gene Names | PTPRN; Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 231 ESTs, 3 Proteins |
| Gene Locus | Not available |
| GO Function | Not available |
* Information From OMIM
Not Available.
* Structure Information
1. Primary Information
Length: 1019 aa
Average Mass: 110.234 kDa
Monoisotopic Mass: 110.165 kDa
2. Domain Information
Annotated Domains: Not Available.
Computationally Assigned Domains (Pfam+HMMER):
| domain name | begin | end | score | e-value |
| Toxin_19 1. | 39 | 71 | -7.6 | 4.4 |
| Prim-Pol 1. | 270 | 445 | -40.1 | 4.9 |
| FDX-ACB 1. | 463 | 550 | -48.6 | 0.92 |
| Gram_pos_anchor 1. | 556 | 596 | 2.4 | 1.8 |
| --- cleavage 658 --- |
| Y_phosphatase 1. | 734 | 961 | 299.8 | 5.7e-87 |
3. Sequence Information
Fasta Sequence: XSB1903.fasta
Amino Acid Sequence and Secondary Structures (PsiPred):
4. 3D Information
Not Available.
* Cleavage Information
1 [sites]
Cleavage sites (±10aa)
[Site 1] PEPSRVSSVS658-SQFSDAAQAS
Ser658 
Ser
 |
| P10 | P9 | P8 | P7 | P6 |
P5 | P4 | P3 | P2 | P1 |
| Pro649 | Glu650 | Pro651 | Ser652 | Arg653 | Val654 | Ser655 | Ser656 | Val657 | Ser658 |
 |
| P1' | P2' | P3' | P4' | P5' |
P6' | P7' | P8' | P9' | P10' |
| Ser659 | Gln660 | Phe661 | Ser662 | Asp663 | Ala664 | Ala665 | Gln666 | Ala667 | Ser668 |
Sequence conservation (by blast)
Sequence conservation (by blast)
| Reference peptide (cleaved bond±30 residues) |
|---|
|
QDLCRQHMATKSLFNRAEGPPEPSRVSSVSSQFSDAAQASPSSHSSTPSWCEEPAQANMD
|
Summary
| # |
organism |
max score |
hits |
top seq |
| 1 |
Homo sapiens |
66.20 |
5 |
protein tyrosine phosphatase, receptor type, N pre |
| 2 |
N/A |
66.20 |
4 |
I |
| 3 |
Bos taurus |
66.20 |
1 |
protein tyrosine phosphatase, receptor type, N |
| 4 |
Pongo pygmaeus |
66.20 |
1 |
hypothetical protein |
| 5 |
Pan troglodytes |
66.20 |
1 |
PREDICTED: protein tyrosine phosphatase, receptor |
| 6 |
synthetic construct |
66.20 |
1 |
Homo sapiens protein tyrosine phosphatase, recepto |
| 7 |
Mus musculus |
63.20 |
9 |
CAA52453.1 |
| 8 |
Rattus norvegicus |
63.20 |
2 |
protein tyrosine phosphatase, receptor type, N |
| 9 |
Rattus sp. |
63.20 |
1 |
BAA07397.1 |
| 10 |
Canis familiaris |
62.40 |
2 |
PREDICTED: similar to Receptor-type tyrosine-prote |
Top-ranked sequences
| organism | matching |
|---|
| Homo sapiens |
Query 629 QDLCRQHMATKSLFNRAEGPPEXXXXXXXX#XXXXXXXXXXXXXXXXXXXWCEEPAQANMD 688
|||||||||||||||||||||| # |||||||||||
Sbjct 629 QDLCRQHMATKSLFNRAEGPPEPSRVSSVS#SQFSDAAQASPSSHSSTPSWCEEPAQANMD 688
|
| N/A |
Query 629 QDLCRQHMATKSLFNRAEGPPEXXXXXXXX#XXXXXXXXXXXXXXXXXXXWCEEPAQANMD 688
|||||||||||||||||||||| # |||||||||||
Sbjct 241 QDLCRQHMATKSLFNRAEGPPEPSRVSSVS#SQFSDAAQASPSSHSSTPSWCEEPAQANMD 300
|
| Bos taurus |
Query 629 QDLCRQHMATKSLFNRAEGPPEXXXXXXXX#XXXXXXXXXXXXXXXXXXXWCEEPAQANMD 688
|||||||||||||||||||||| # |||||||||||
Sbjct 629 QDLCRQHMATKSLFNRAEGPPEPSRVSSVS#SQFSDAAQASPSSHSSTPSWCEEPAQANMD 688
|
| Pongo pygmaeus |
Query 629 QDLCRQHMATKSLFNRAEGPPEXXXXXXXX#XXXXXXXXXXXXXXXXXXXWCEEPAQANMD 688
|||||||||||||||||||||| # |||||||||||
Sbjct 629 QDLCRQHMATKSLFNRAEGPPEPSRVSSVS#SQFSDAAQASPSSHSSTPSWCEEPAQANMD 688
|
| Pan troglodytes |
Query 629 QDLCRQHMATKSLFNRAEGPPEXXXXXXXX#XXXXXXXXXXXXXXXXXXXWCEEPAQANMD 688
|||||||||||||||||||||| # |||||||||||
Sbjct 629 QDLCRQHMATKSLFNRAEGPPEPSRVSSVS#SQFSDAAQASPSSHSSTPSWCEEPAQANMD 688
|
| synthetic construct |
Query 629 QDLCRQHMATKSLFNRAEGPPEXXXXXXXX#XXXXXXXXXXXXXXXXXXXWCEEPAQANMD 688
|||||||||||||||||||||| # |||||||||||
Sbjct 241 QDLCRQHMATKSLFNRAEGPPEPSRVSSVS#SQFSDAAQASPSSHSSTPSWCEEPAQANMD 300
|
| Mus musculus |
Query 629 QDLCRQHMATKSLFNRAEGPPEXXXXXXXX#XXXXXXXXXXXXXXXXXXXWCEEPAQANMD 688
||||||||||||||||||| || # |||||||||||
Sbjct 646 QDLCRQHMATKSLFNRAEGQPEPSRVSSVS#SQFSDAAQASPSSHSSTPSWCEEPAQANMD 705
|
| Rattus norvegicus |
Query 629 QDLCRQHMATKSLFNRAEGPPEXXXXXXXX#XXXXXXXXXXXXXXXXXXXWCEEPAQANMD 688
||||||||||||||||||| || # |||||||||||
Sbjct 633 QDLCRQHMATKSLFNRAEGQPEPSRVSSVS#SQFSDAAQASPSSHSSTPSWCEEPAQANMD 692
|
| Rattus sp. |
Query 629 QDLCRQHMATKSLFNRAEGPPEXXXXXXXX#XXXXXXXXXXXXXXXXXXXWCEEPAQANMD 688
||||||||||||||||||| || # |||||||||||
Sbjct 572 QDLCRQHMATKSLFNRAEGQPEPSRVSSVS#SQFSDAAQASPSSHSSTPSWCEEPAQANMD 631
|
| Canis familiaris |
Query 629 QDLCRQHMATKSLFNRAEGPPEXXXXXXXX#XXXXXXXXXXXXXXXXXXXWCEEPAQANMD 688
||||||||| ||||+||||||| # |||||||||||
Sbjct 726 QDLCRQHMAAKSLFSRAEGPPEPSRVSSVS#SQFSDAAQASPSSHSSTPSWCEEPAQANMD 785
|
