XSB1904 : protein tyrosine phosphatase, receptor type, N precursor variant [Homo sapiens]
[ CaMP Format ]
This entry is computationally expanded from SB0024
* Basic Information
| Organism | Homo sapiens (human) |
| Protein Names | Protein tyrosine phosphatase, receptor type, N variant; protein tyrosine phosphatase; receptor type; N precursor variant |
| Gene Names | Not available |
| Gene Locus | Not available |
| GO Function | Not available |
| Entrez Protein |
Entrez Nucleotide |
Entrez Gene |
UniProt |
OMIM |
HGNC |
HPRD |
KEGG |
| BAD92605 |
N/A |
N/A |
Q59FU1 |
N/A |
N/A |
N/A |
hsa: |
* Information From OMIM
Not Available.
* Structure Information
1. Primary Information
Length: 824 aa
Average Mass: 88.482 kDa
Monoisotopic Mass: 88.427 kDa
2. Domain Information
Annotated Domains: interpro / pfam / smart / prosite
Computationally Assigned Domains (Pfam+HMMER):
| domain name | begin | end | score | e-value |
| Prim-Pol 1. | 242 | 417 | -40.2 | 4.9 |
| FDX-ACB 1. | 446 | 522 | -50.9 | 1.5 |
| Gram_pos_anchor 1. | 528 | 568 | 2.4 | 1.8 |
| --- cleavage 630 --- |
| Y_phosphatase 1. | 706 | 824 | 37.7 | 9.4e-10 |
3. Sequence Information
Fasta Sequence: XSB1904.fasta
Amino Acid Sequence and Secondary Structures (PsiPred):
4. 3D Information
Not Available.
* Cleavage Information
1 [sites]
Cleavage sites (±10aa)
[Site 1] PEPSRVSSVS630-SQFSDAAQAS
Ser630 
Ser
 |
| P10 | P9 | P8 | P7 | P6 |
P5 | P4 | P3 | P2 | P1 |
| Pro621 | Glu622 | Pro623 | Ser624 | Arg625 | Val626 | Ser627 | Ser628 | Val629 | Ser630 |
 |
| P1' | P2' | P3' | P4' | P5' |
P6' | P7' | P8' | P9' | P10' |
| Ser631 | Gln632 | Phe633 | Ser634 | Asp635 | Ala636 | Ala637 | Gln638 | Ala639 | Ser640 |
Sequence conservation (by blast)
Sequence conservation (by blast)
| Reference peptide (cleaved bond±30 residues) |
|---|
|
QDLCRQHMATKSLFNRAEGPPEPSRVSSVSSQFSDAAQASPSSHSSTPSWCEEPAQANMD
|
Summary
| # |
organism |
max score |
hits |
top seq |
| 1 |
Homo sapiens |
66.20 |
5 |
protein tyrosine phosphatase, receptor type, N pre |
| 2 |
N/A |
66.20 |
4 |
I |
| 3 |
Bos taurus |
66.20 |
1 |
protein tyrosine phosphatase, receptor type, N |
| 4 |
Pongo pygmaeus |
66.20 |
1 |
hypothetical protein |
| 5 |
Pan troglodytes |
66.20 |
1 |
PREDICTED: protein tyrosine phosphatase, receptor |
| 6 |
synthetic construct |
66.20 |
1 |
Homo sapiens protein tyrosine phosphatase, recepto |
| 7 |
Mus musculus |
63.20 |
9 |
PREDICTED: similar to Receptor-type tyrosine-prote |
| 8 |
Rattus norvegicus |
63.20 |
2 |
protein tyrosine phosphatase, receptor type, N |
| 9 |
Rattus sp. |
63.20 |
1 |
BAA07397.1 |
| 10 |
Canis familiaris |
62.40 |
2 |
PREDICTED: similar to Receptor-type tyrosine-prote |
Top-ranked sequences
| organism | matching |
|---|
| Homo sapiens |
Query 601 QDLCRQHMATKSLFNRAEGPPEXXXXXXXX#XXXXXXXXXXXXXXXXXXXWCEEPAQANMD 660
|||||||||||||||||||||| # |||||||||||
Sbjct 601 QDLCRQHMATKSLFNRAEGPPEPSRVSSVS#SQFSDAAQASPSSHSSTPSWCEEPAQANMD 660
|
| N/A |
Query 601 QDLCRQHMATKSLFNRAEGPPEXXXXXXXX#XXXXXXXXXXXXXXXXXXXWCEEPAQANMD 660
|||||||||||||||||||||| # |||||||||||
Sbjct 241 QDLCRQHMATKSLFNRAEGPPEPSRVSSVS#SQFSDAAQASPSSHSSTPSWCEEPAQANMD 300
|
| Bos taurus |
Query 601 QDLCRQHMATKSLFNRAEGPPEXXXXXXXX#XXXXXXXXXXXXXXXXXXXWCEEPAQANMD 660
|||||||||||||||||||||| # |||||||||||
Sbjct 629 QDLCRQHMATKSLFNRAEGPPEPSRVSSVS#SQFSDAAQASPSSHSSTPSWCEEPAQANMD 688
|
| Pongo pygmaeus |
Query 601 QDLCRQHMATKSLFNRAEGPPEXXXXXXXX#XXXXXXXXXXXXXXXXXXXWCEEPAQANMD 660
|||||||||||||||||||||| # |||||||||||
Sbjct 629 QDLCRQHMATKSLFNRAEGPPEPSRVSSVS#SQFSDAAQASPSSHSSTPSWCEEPAQANMD 688
|
| Pan troglodytes |
Query 601 QDLCRQHMATKSLFNRAEGPPEXXXXXXXX#XXXXXXXXXXXXXXXXXXXWCEEPAQANMD 660
|||||||||||||||||||||| # |||||||||||
Sbjct 629 QDLCRQHMATKSLFNRAEGPPEPSRVSSVS#SQFSDAAQASPSSHSSTPSWCEEPAQANMD 688
|
| synthetic construct |
Query 601 QDLCRQHMATKSLFNRAEGPPEXXXXXXXX#XXXXXXXXXXXXXXXXXXXWCEEPAQANMD 660
|||||||||||||||||||||| # |||||||||||
Sbjct 241 QDLCRQHMATKSLFNRAEGPPEPSRVSSVS#SQFSDAAQASPSSHSSTPSWCEEPAQANMD 300
|
| Mus musculus |
Query 601 QDLCRQHMATKSLFNRAEGPPEXXXXXXXX#XXXXXXXXXXXXXXXXXXXWCEEPAQANMD 660
||||||||||||||||||| || # |||||||||||
Sbjct 494 QDLCRQHMATKSLFNRAEGQPEPSRVSSVS#SQFSDAAQASPSSHSSTPSWCEEPAQANMD 553
|
| Rattus norvegicus |
Query 601 QDLCRQHMATKSLFNRAEGPPEXXXXXXXX#XXXXXXXXXXXXXXXXXXXWCEEPAQANMD 660
||||||||||||||||||| || # |||||||||||
Sbjct 633 QDLCRQHMATKSLFNRAEGQPEPSRVSSVS#SQFSDAAQASPSSHSSTPSWCEEPAQANMD 692
|
| Rattus sp. |
Query 601 QDLCRQHMATKSLFNRAEGPPEXXXXXXXX#XXXXXXXXXXXXXXXXXXXWCEEPAQANMD 660
||||||||||||||||||| || # |||||||||||
Sbjct 572 QDLCRQHMATKSLFNRAEGQPEPSRVSSVS#SQFSDAAQASPSSHSSTPSWCEEPAQANMD 631
|
| Canis familiaris |
Query 601 QDLCRQHMATKSLFNRAEGPPEXXXXXXXX#XXXXXXXXXXXXXXXXXXXWCEEPAQANMD 660
||||||||| ||||+||||||| # |||||||||||
Sbjct 726 QDLCRQHMAAKSLFSRAEGPPEPSRVSSVS#SQFSDAAQASPSSHSSTPSWCEEPAQANMD 785
|
