logo CaMPDB: Calpain for Modulatory Proteolysis Database

XSB2197 : PREDICTED: integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) [Taeniopygia guttata]

[ CaMP Format ]

This entry is computationally expanded from SB0063

* Basic Information

OrganismTaeniopygia guttata
Protein Namesintegrin; beta 1 (fibronectin receptor; beta polypeptide; antigen CD29 includes MDF2; MSK12)
Gene NamesLOC100230947; gene.298304; Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 10 Proteins
Gene LocusNot available
GO FunctionNot available
Entrez Protein Entrez Nucleotide Entrez Gene UniProt OMIM HGNC HPRD KEGG
XP_002190745 XM_002190709 100230947 N/A N/A N/A N/A N/A

* Information From OMIM

Not Available.

* Structure Information

1. Primary Information

Length: 818 aa

Average Mass: 90.576 kDa

Monoisotopic Mass: 90.516 kDa

2. Domain Information

Annotated Domains: Not Available.

Computationally Assigned Domains (Pfam+HMMER):

domain namebeginendscoree-value
Integrin_beta 1. 534841125.00
EGF_2 1. 48652010.60.18
EGF_2 2. 53657320.80.0057
EGF_2 3. 58061021.60.0032
EGF_2 4. 61965032.91.3e-06
Integrin_B_tail 1. 660748167.15e-47
Integrin_b_cyt 1. 772817112.31.6e-30
--- cleavage 811 (inside Integrin_b_cyt 772..817) ---
--- cleavage 797 (inside Integrin_b_cyt 772..817) ---
--- cleavage 809 (inside Integrin_b_cyt 772..817) ---
--- cleavage 798 (inside Integrin_b_cyt 772..817) ---

3. Sequence Information

Fasta Sequence: XSB2197.fasta

Amino Acid Sequence and Secondary Structures (PsiPred):

4. 3D Information

Not Available.

* Cleavage Information

4 [sites]

Cleavage sites (±10aa)

[Site 1] IYKSAVTTVV811-NPKYEGK

Val811 Asn

P10 P9 P8 P7 P6 P5 P4 P3 P2 P1
Ile802Tyr803Lys804Ser805Ala806Val807Thr808Thr809Val810Val811
P1' P2' P3' P4' P5' P6' P7' P8' P9' P10'
Asn812Pro813Lys814Tyr815Glu816Gly817Lys818---

Sequence conservation (by blast)

[Site 2] KEKMNAKWDT797-GENPIYKSAV

Thr797 Gly

P10 P9 P8 P7 P6 P5 P4 P3 P2 P1
Lys788Glu789Lys790Met791Asn792Ala793Lys794Trp795Asp796Thr797
P1' P2' P3' P4' P5' P6' P7' P8' P9' P10'
Gly798Glu799Asn800Pro801Ile802Tyr803Lys804Ser805Ala806Val807

Sequence conservation (by blast)

[Site 3] NPIYKSAVTT809-VVNPKYEGK

Thr809 Val

P10 P9 P8 P7 P6 P5 P4 P3 P2 P1
Asn800Pro801Ile802Tyr803Lys804Ser805Ala806Val807Thr808Thr809
P1' P2' P3' P4' P5' P6' P7' P8' P9' P10'
Val810Val811Asn812Pro813Lys814Tyr815Glu816Gly817Lys818-

Sequence conservation (by blast)

[Site 4] EKMNAKWDTG798-ENPIYKSAVT

Gly798 Glu

P10 P9 P8 P7 P6 P5 P4 P3 P2 P1
Glu789Lys790Met791Asn792Ala793Lys794Trp795Asp796Thr797Gly798
P1' P2' P3' P4' P5' P6' P7' P8' P9' P10'
Glu799Asn800Pro801Ile802Tyr803Lys804Ser805Ala806Val807Thr808

Sequence conservation (by blast)

* References

None.