XSB2223 : growth associated protein 43, isoform CRA_a [Rattus norvegicus]
[ CaMP Format ]
This entry is computationally expanded from SB0067
* Basic Information
| Organism | Rattus norvegicus (Norway rat) |
| Protein Names | growth associated protein 43; isoform CRA_a |
| Gene Names | Gap43 |
| Gene Locus | Not available |
| GO Function | Not available |
* Information From OMIM
Not Available.
* Structure Information
1. Primary Information
Length: 177 aa
Average Mass: 18.839 kDa
Monoisotopic Mass: 18.828 kDa
2. Domain Information
Annotated Domains: Not Available.
Computationally Assigned Domains (Pfam+HMMER):
| domain name | begin | end | score | e-value |
|---|---|---|---|---|
| --- cleavage 4 --- | ||||
| Neuromodulin 1. | 14 | 177 | 167.9 | 2.9e-47 |
3. Sequence Information
Fasta Sequence: XSB2223.fasta
Amino Acid Sequence and Secondary Structures (PsiPred):
4. 3D Information
Not Available.
* Cleavage Information
1 [sites]
Cleavage sites (±10aa)
[Site 1] MLCC4-MRRTKQVEKN
Cys4 
Met
 |
|||||||||
| P10 | P9 | P8 | P7 | P6 | P5 | P4 | P3 | P2 | P1 |
|---|---|---|---|---|---|---|---|---|---|
| - | - | - | - | - | - | Met1 | Leu2 | Cys3 | Cys4 |
 |
|||||||||
| P1' | P2' | P3' | P4' | P5' | P6' | P7' | P8' | P9' | P10' |
| Met5 | Arg6 | Arg7 | Thr8 | Lys9 | Gln10 | Val11 | Glu12 | Lys13 | Asn14 |
Sequence conservation (by blast)
* References
[PubMed ID: 15632090] Florea L, Di Francesco V, Miller J, Turner R, Yao A, Harris M, Walenz B, Mobarry C, Merkulov GV, Charlab R, Dew I, Deng Z, Istrail S, Li P, Sutton G, Gene and alternative splicing annotation with AIR. Genome Res. 2005 Jan;15(1):54-66.