logo CaMPDB: Calpain for Modulatory Proteolysis Database

SB0028 : Protamine-YII

[ CaMP Format ]

* Basic Information

OrganismClupea harengus (Atlantic herring)
Protein NamesRecName: Full=Protamine-YII; AltName: Full=Clupeine-YII; Protamine-YII; Clupeine-YII
Gene NamesNot available
Gene LocusNot available
GO FunctionNot available
Entrez Protein Entrez Nucleotide Entrez Gene UniProt OMIM HGNC HPRD KEGG
P69008 N/A N/A P69008 N/A N/A N/A N/A

* Information From OMIM

Not Available.

* Structure Information

1. Primary Information

Length: 30 aa

Average Mass: 4.049 kDa

Monoisotopic Mass: 4.047 kDa

2. Domain Information

Annotated Domains: interpro / pfam / smart / prosite

Computationally Assigned Domains (Pfam+HMMER):

domain namebeginendscoree-value

3. Sequence Information

Fasta Sequence: SB0028.fasta

Amino Acid Sequence and Secondary Structures (PsiPred):

4. 3D Information

Not Available.

* Cleavage Information

2 [sites]

Source Reference: [PubMed ID: 2993267] Hayashi M, Inomata M, Nakamura M, Imahori K, Kawashima S, Hydrolysis of protamine by calcium-activated neutral protease (CANP). J Biochem. 1985 May;97(5):1363-70.

Cleavage sites (±10aa)

[Site 1] TRRASRPVRR14-RRPRRVSRRR

Arg14 Arg

P10 P9 P8 P7 P6 P5 P4 P3 P2 P1
Thr5Arg6Arg7Ala8Ser9Arg10Pro11Val12Arg13Arg14
P1' P2' P3' P4' P5' P6' P7' P8' P9' P10'
Arg15Arg16Pro17Arg18Arg19Val20Ser21Arg22Arg23Arg24

Sequence conservation (by blast)

[Site 2] RRRRPRRVSR22-RRRARRRR

Arg22 Arg

P10 P9 P8 P7 P6 P5 P4 P3 P2 P1
Arg13Arg14Arg15Arg16Pro17Arg18Arg19Val20Ser21Arg22
P1' P2' P3' P4' P5' P6' P7' P8' P9' P10'
Arg23Arg24Arg25Ala26Arg27Arg28Arg29Arg30--

Sequence conservation (by blast)

* References

None.