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SB0030 : von Willebrand factor

[ CaMP Format ]

* Basic Information

OrganismMus musculus (house mouse)
Protein Namesvon Willebrand factor precursor [Mus musculus]; von Willebrand factor precursor; vwf; von Willebrand factor; vWF; von Willebrand antigen 2; von Willebrand antigen II
Gene NamesVwf; Vwf {ECO:0000312|MGI:MGI:98941}; Von Willebrand factor homolog
Gene Locus6 59.32 cM; chromosome 6
GO FunctionNot available
Entrez Protein Entrez Nucleotide Entrez Gene UniProt OMIM HGNC HPRD KEGG
NP_035838 NM_011708 22371 Q8CIZ8 N/A N/A N/A mmu:22371

* Information From OMIM

Not Available.

* Structure Information

1. Primary Information

Length: 2813 aa

Average Mass: 309.154 kDa

Monoisotopic Mass: 308.951 kDa

2. Domain Information

Annotated Domains: interpro / pfam / smart / prosite

Computationally Assigned Domains (Pfam+HMMER):

domain namebeginendscoree-value
von Willebrand factor type D domain 1. 351791.00.2
Trypsin Inhibitor like cysteine rich domain 1. 23726618.09.5
C8 domain 1. 31733132.04.1
Trypsin Inhibitor like cysteine rich domain 2. 36738431.04.2
Pacifastin inhibitor (LCMII) 1. 43244217.00.1
Trypsin Inhibitor like cysteine rich domain 3. 60762326.07.3
von Willebrand factor type C domain 1. 65165140.026.3
Trypsin Inhibitor like cysteine rich domain 4. 6527071.016.1
Trypsin Inhibitor like cysteine rich domain 5. 72873634.00.5
--- cleavage 763 ---
von Willebrand factor type C domain 2. 79182223.09.0
VWA N-terminal 1. 84685825.04.8
DHH family 1. 86398612.00.0
VWA N-terminal 2. 1098111927.03.4
Trypsin Inhibitor like cysteine rich domain 6. 1124113712.013.6
von Willebrand factor type C domain 3. 1142118012.017.1
C8 domain 2. 1223124142.02.6
DHH family 2. 1303136430.00.0
von Willebrand factor type A domain 1. 149816441.00.0
von Willebrand factor type A domain 2. 169118581.00.1
Pacifastin inhibitor (LCMII) 2. 188919094.00.0
--- cleavage 1913 ---
Trypsin Inhibitor like cysteine rich domain 7. 191719518.08.1
von Willebrand factor type C domain 4. 2184218441.023.6
VWA N-terminal 3. 2211222724.02.4
VWA N-terminal 4. 2274229721.09.7
VWA N-terminal 5. 2386239765.09.6
Pacifastin inhibitor (LCMII) 3. 2419242724.05.7
Trypsin Inhibitor like cysteine rich domain 8. 2448249114.013.4
C8 domain 3. 2558258024.07.3
C8 domain 4. 2605262343.02.3
von Willebrand factor type C domain 5. 2665271912.04.5
von Willebrand factor type C domain 6. 2788278824.013.0

3. Sequence Information

Fasta Sequence: SB0030.fasta

Amino Acid Sequence and Secondary Structures (PsiPred):

4. 3D Information

Known Structures in PDB: 1U0O (X-ray; 270 A; C=1261-1468)

* Cleavage Information

2 [sites] cleaved by Calpain 2

Source Reference: [PubMed ID: 2845608] Nozaki H, Amino acid analysis of human von Willebrand factor fragments cleaved by porcine calpain II. Tokai J Exp Clin Med. 1987 Nov;12(4):223-7.

Cleavage sites (±10aa)

[Site 1] SSPLSHRSKR763-SLSCRPPMVK

Arg763 Ser

P10 P9 P8 P7 P6 P5 P4 P3 P2 P1
Ser754Ser755Pro756Leu757Ser758His759Arg760Ser761Lys762Arg763
P1' P2' P3' P4' P5' P6' P7' P8' P9' P10'
Ser764Leu765Ser766Cys767Arg768Pro769Pro770Met771Val772Lys773

Sequence conservation (by blast)

[Site 2] CLANGQTLLQ1913-SHRVNCDHGP

Gln1913 Ser

P10 P9 P8 P7 P6 P5 P4 P3 P2 P1
Cys1904Leu1905Ala1906Asn1907Gly1908Gln1909Thr1910Leu1911Leu1912Gln1913
P1' P2' P3' P4' P5' P6' P7' P8' P9' P10'
Ser1914His1915Arg1916Val1917Asn1918Cys1919Asp1920His1921Gly1922Pro1923

Sequence conservation (by blast)

* References

[PubMed ID: 24850761] Yee A, Gildersleeve RD, Gu S, Kretz CA, McGee BM, Carr KM, Pipe SW, Ginsburg D, A von Willebrand factor fragment containing the D'D3 domains is sufficient to stabilize coagulation factor VIII in mice. Blood. 2014 Jul 17;124(3):445-52. doi: 10.1182/blood-2013-11-540534. Epub 2014

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