SB0050 : EGFR, ErbB-1, Epidermal growth factor receptor
[ CaMP Format ]
* Basic Information
Organism | Homo sapiens (human) |
Protein Names | epidermal growth factor receptor isoform a precursor [Homo sapiens]; epidermal growth factor receptor isoform a precursor; avian erythroblastic leukemia viral (v-erb-b) oncogene homolog; cell proliferation-inducing protein 61; cell growth inhibiting protein 40; proto-oncogene c-ErbB-1; receptor tyrosine-protein kinase erbB-1; Epidermal growth factor receptor; 2.7.10.1; Proto-oncogene c-ErbB-1; Receptor tyrosine-protein kinase erbB-1 |
Gene Names | EGFR; ERBB, ERBB1, HER1; ERBB; ERBB1; HER1; epidermal growth factor receptor |
Gene Locus | 7p12; chromosome 7 |
GO Function | Not available |
* Information From OMIM
Description: EGFR and its ligands are cell signaling molecules involved in diverse cellular functions, including cell proliferation, differentiation, motility, and survival, and in tissue development (Wang et al., 2004).
* Structure Information
1. Primary Information
Length: 1210 aa
Average Mass: 134.276 kDa
Monoisotopic Mass: 134.190 kDa
2. Domain Information
Annotated Domains: interpro / pfam / smart / prosite
Computationally Assigned Domains (Pfam+HMMER):
domain name | begin | end | score | e-value |
---|---|---|---|---|
Receptor L domain 1. | 57 | 167 | 1.0 | 0.7 |
Growth factor receptor domain IV 1. | 294 | 342 | 18.0 | 10.6 |
Furin-like cysteine rich region 1. | 554 | 598 | 49.0 | 11.7 |
Furin-like cysteine rich region 2. | 618 | 636 | 49.0 | 3.6 |
GRB2-binding adapter (GAPT) 1. | 650 | 687 | 13.0 | 0.3 |
--- cleavage 683 (inside GRB2-binding adapter (GAPT) 650..687) --- | ||||
--- cleavage 733 --- | ||||
Phosphotransferase enzyme family 1. | 824 | 860 | 162.0 | 0.0 |
3. Sequence Information
Fasta Sequence: SB0050.fasta
Amino Acid Sequence and Secondary Structures (PsiPred):
4. 3D Information
Known Structures in PDB: 1DNQ (Model; -; A=25-336), 1DNR (Model; -; A=337-645), 1IVO (X-ray; 330 A; A/B=25-646), 1M14 (X-ray; 260 A; A=695-1022), 1M17 (X-ray; 260 A; A=695-1022), 1MOX (X-ray; 250 A; A/B=25-525), 1NQL (X-ray; 280 A; A=25-642), 1XKK (X-ray; 240 A; A=695-1022), 1YY9 (X-ray; 260 A; A=25-642), 1Z9I (NMR; -; A=669-721), 2EB2 (X-ray; 250 A; A=695-1022), 2EB3 (X-ray; 284 A; A=695-1022), 2EXP (Model; -; A=311-326), 2EXQ (Model; -; A=27-536), 2GS2 (X-ray; 280 A; A=696-1022), 2GS6 (X-ray; 260 A; A=696-1022), 2GS7 (X-ray; 260 A; A/B=696-1022), 2ITN (X-ray; 247 A; A=696-1019), 2ITO (X-ray; 325 A; A=696-1022), 2ITP (X-ray; 274 A; A=696-1022), 2ITQ (X-ray; 268 A; A=696-1022), 2ITT (X-ray; 273 A; A=696-1022), 2ITU (X-ray; 280 A; A=696-1022), 2ITV (X-ray; 247 A; A=696-1022), 2ITW (X-ray; 288 A; A=696-1022), 2ITX (X-ray; 298 A; A=696-1022), 2ITY (X-ray; 342 A; A=696-1022), 2ITZ (X-ray; 272 A; A=696-1022), 2J5E (X-ray; 310 A; A=696-1022), 2J5F (X-ray; 300 A; A=696-1022), 2J6M (X-ray; 310 A; A=696-1022), 2JIT (X-ray; 310 A; A/B=696-1022), 2JIU (X-ray; 305 A; A/B=695-1022), 2JIV (X-ray; 350 A; A/B=695-1022), 2KS1 (NMR; -; B=634-677), 2M0B (NMR; -; A/B=634-677), 2M20 (NMR; -; A/B=642-697), 2RF9 (X-ray; 350 A; A/B=696-1022), 2RFD (X-ray; 360 A; A/B=702-1022), 2RFE (X-ray; 290 A; A/B/C/D=702-1022), 2RGP (X-ray; 200 A; A=702-1016), 3B2U (X-ray; 258 A; A/B/E/I/M/P/S/V=335-538), 3B2V (X-ray; 330 A; A=25-642), 3BEL (X-ray; 230 A; A=702-1016), 3BUO (X-ray; 260 A; A/C=1063-1075), 3C09 (X-ray; 320 A; A/D=336-538), 3G5V (X-ray; 200 A; C=311-326), 3G5Y (X-ray; 159 A; E=311-326), 3GOP (X-ray; 280 A; A=669-1022), 3GT8 (X-ray; 296 A; A/B/C/D=696-1022), 3IKA (X-ray; 290 A; A/B=694-1022), 3LZB (X-ray; 270 A; A/B/C/D/E/F/G/H=696-983), 3NJP (X-ray; 330 A; A/B=25-638), 3OB2 (X-ray; 210 A; A=1063-1074), 3OP0 (X-ray; 252 A; C/D=1066-1076), 3P0Y (X-ray; 180 A; A=334-538), 3PFV (X-ray; 227 A; C/D=1066-1076), 3POZ (X-ray; 150 A; A=696-1022), 3QWQ (X-ray; 275 A; A=1-642), 3UG1 (X-ray; 275 A; A=695-1022), 3UG2 (X-ray; 250 A; A=695-1022), 3VJN (X-ray; 234 A; A=695-1022), 3VJO (X-ray; 264 A; A=695-1022), 3VRP (X-ray; 152 A; B=1062-1074), 3VRR (X-ray; 200 A; C=1062-1074), 3W2O (X-ray; 235 A; A=698-1022), 3W2P (X-ray; 205 A; A=698-1022), 3W2Q (X-ray; 220 A; A=698-1022), 3W2R (X-ray; 205 A; A=698-1022), 3W2S (X-ray; 190 A; A=696-1022), 3W32 (X-ray; 180 A; A=696-1022), 3W33 (X-ray; 170 A; A=696-1022), 4G5J (X-ray; 280 A; A=696-1022), 4G5P (X-ray; 317 A; A/B=696-1022), 4HJO (X-ray; 275 A; A=696-1022), 4I1Z (X-ray; 300 A; A=695-1022), 4I20 (X-ray; 334 A; A=695-1022), 4I21 (X-ray; 337 A; A/B=695-1022), 4I22 (X-ray; 171 A; A=695-1022), 4I23 (X-ray; 280 A; A=695-1022), 4I24 (X-ray; 180 A; A/B=695-1022), 4JQ7 (X-ray; 273 A; A=696-1021), 4JQ8 (X-ray; 283 A; A=696-1021), 4JR3 (X-ray; 270 A; A=696-1021), 4JRV (X-ray; 280 A; A=696-1021), 4KRL (X-ray; 285 A; A=335-538), 4KRM (X-ray; 266 A; A/C/E/G/I/K=335-538), 4KRO (X-ray; 305 A; A=25-642), 4KRP (X-ray; 282 A; A=25-642), 4LI5 (X-ray; 264 A; A=696-1020), 4LL0 (X-ray; 400 A; A/B=694-1022), 4LQM (X-ray; 250 A; A=694-1022), 4LRM (X-ray; 353 A; A/B/C/D/E=694-1022), 4R5S (X-ray; 300 A; A=696-1022), 4RIW (X-ray; 310 A; B/D=682-1022), 4RIX (X-ray; 310 A; B/D=682-1022), 4RIY (X-ray; 298 A; B/D=682-1022), 4RJ4 (X-ray; 278 A; A=695-1022), 4RJ5 (X-ray; 310 A; A=695-1022), 4RJ6 (X-ray; 270 A; A=695-1022), 4RJ7 (X-ray; 255 A; A=695-1022), 4RJ8 (X-ray; 250 A; A=695-1022), 4TKS (X-ray; 320 A; A=695-1022), 4WKQ (X-ray; 185 A; A=696-1022), 4WRG (X-ray; 190 A; A=696-1022)
* Cleavage Information
7 [sites] cleaved by Calpain 2
Source Reference: [PubMed ID: 8055914] Gregoriou M, Willis AC, Pearson MA, Crawford C, The calpain cleavage sites in the epidermal growth factor receptor kinase domain. Eur J Biochem. 1994 Jul 15;223(2):455-64.
Cleavage sites (±10aa)
[Site 1] VRKRTLRRLL683-QERELVEPLT
Leu683 Gln
iTraq-117 Signal 3131.0 () for VRKRTLRRLL
iTraq-117 Signal 3354.7 () for QERELVEPLT
P10 | P9 | P8 | P7 | P6 | P5 | P4 | P3 | P2 | P1 |
---|---|---|---|---|---|---|---|---|---|
Val674 | Arg675 | Lys676 | Arg677 | Thr678 | Leu679 | Arg680 | Arg681 | Leu682 | Leu683 |
P1' | P2' | P3' | P4' | P5' | P6' | P7' | P8' | P9' | P10' |
Gln684 | Glu685 | Arg686 | Glu687 | Leu688 | Val689 | Glu690 | Pro691 | Leu692 | Thr693 |
Sequence conservation (by blast)
[Site 2] GTVYKGLWIP733-EGEKVKIPVA
Pro733 Glu
P10 | P9 | P8 | P7 | P6 | P5 | P4 | P3 | P2 | P1 |
---|---|---|---|---|---|---|---|---|---|
Gly724 | Thr725 | Val726 | Tyr727 | Lys728 | Gly729 | Leu730 | Trp731 | Ile732 | Pro733 |
P1' | P2' | P3' | P4' | P5' | P6' | P7' | P8' | P9' | P10' |
Glu734 | Gly735 | Glu736 | Lys737 | Val738 | Lys739 | Ile740 | Pro741 | Val742 | Ala743 |
Sequence conservation (by blast)
[Site 3] QGFFSSPSTS1030-RTPLLSSLSA
Ser1030 Arg
P10 | P9 | P8 | P7 | P6 | P5 | P4 | P3 | P2 | P1 |
---|---|---|---|---|---|---|---|---|---|
Gln1021 | Gly1022 | Phe1023 | Phe1024 | Ser1025 | Ser1026 | Pro1027 | Ser1028 | Thr1029 | Ser1030 |
P1' | P2' | P3' | P4' | P5' | P6' | P7' | P8' | P9' | P10' |
Arg1031 | Thr1032 | Pro1033 | Leu1034 | Leu1035 | Ser1036 | Ser1037 | Leu1038 | Ser1039 | Ala1040 |
Sequence conservation (by blast)
[Site 4] IDRNGLQSCP1059-IKEDSFLQRY
Pro1059 Ile
P10 | P9 | P8 | P7 | P6 | P5 | P4 | P3 | P2 | P1 |
---|---|---|---|---|---|---|---|---|---|
Ile1050 | Asp1051 | Arg1052 | Asn1053 | Gly1054 | Leu1055 | Gln1056 | Ser1057 | Cys1058 | Pro1059 |
P1' | P2' | P3' | P4' | P5' | P6' | P7' | P8' | P9' | P10' |
Ile1060 | Lys1061 | Glu1062 | Asp1063 | Ser1064 | Phe1065 | Leu1066 | Gln1067 | Arg1068 | Tyr1069 |
Sequence conservation (by blast)
[Site 5] LTEDSIDDTF1086-LPVPEYINQS
Phe1086 Leu
P10 | P9 | P8 | P7 | P6 | P5 | P4 | P3 | P2 | P1 |
---|---|---|---|---|---|---|---|---|---|
Leu1077 | Thr1078 | Glu1079 | Asp1080 | Ser1081 | Ile1082 | Asp1083 | Asp1084 | Thr1085 | Phe1086 |
P1' | P2' | P3' | P4' | P5' | P6' | P7' | P8' | P9' | P10' |
Leu1087 | Pro1088 | Val1089 | Pro1090 | Glu1091 | Tyr1092 | Ile1093 | Asn1094 | Gln1095 | Ser1096 |
Sequence conservation (by blast)
[Site 6] VQPTCVNSTF1151-DSPAHWAQKG
Phe1151 Asp
P10 | P9 | P8 | P7 | P6 | P5 | P4 | P3 | P2 | P1 |
---|---|---|---|---|---|---|---|---|---|
Val1142 | Gln1143 | Pro1144 | Thr1145 | Cys1146 | Val1147 | Asn1148 | Ser1149 | Thr1150 | Phe1151 |
P1' | P2' | P3' | P4' | P5' | P6' | P7' | P8' | P9' | P10' |
Asp1152 | Ser1153 | Pro1154 | Ala1155 | His1156 | Trp1157 | Ala1158 | Gln1159 | Lys1160 | Gly1161 |
Sequence conservation (by blast)
[Site 7] FFPKEAKPNG1185-IFKGSTAENA
Gly1185 Ile
P10 | P9 | P8 | P7 | P6 | P5 | P4 | P3 | P2 | P1 |
---|---|---|---|---|---|---|---|---|---|
Phe1176 | Phe1177 | Pro1178 | Lys1179 | Glu1180 | Ala1181 | Lys1182 | Pro1183 | Asn1184 | Gly1185 |
P1' | P2' | P3' | P4' | P5' | P6' | P7' | P8' | P9' | P10' |
Ile1186 | Phe1187 | Lys1188 | Gly1189 | Ser1190 | Thr1191 | Ala1192 | Glu1193 | Asn1194 | Ala1195 |
Sequence conservation (by blast)
* References
[PubMed ID: 25002532] Schaeffer D, Somarelli JA, Hanna G, Palmer GM, Garcia-Blanco MA, Cellular migration and invasion uncoupled: increased migration is not an inexorable consequence of epithelial-to-mesenchymal transition. Mol Cell Biol. 2014 Sep 15;34(18):3486-99. doi: 10.1128/MCB.00694-14. Epub 2014