SB0065 : ADP-ribosyltransferase (NAD+) poly(ADP-ribose) polymerase
[ CaMP Format ]
* Basic Information
Organism | Bos taurus (cattle) |
Protein Names | poly [ADP-ribose] polymerase 1 [Bos taurus]; poly [ADP-ribose] polymerase 1; poly (ADP-ribose) polymerase family, member 1; poly(ADP-ribose) synthetase; ADP-ribosyltransferase (NAD+) poly (ADP-ribose) polymerase); PARP-1; ADP-ribosyltransferase diphtheria toxin-like 1; poly[ADP-ribose] synthetase 1; NAD(+) ADP-ribosyltransferase 1; ADPRT 1; poly[ADP-ribose] synthase 1; Poly [ADP-ribose] polymerase 1; 2.4.2.30; ARTD1; Poly[ADP-ribose] synthase 1 |
Gene Names | PARP1; ADPRT; poly (ADP-ribose) polymerase 1 |
Gene Locus | 16; chromosome 16 |
GO Function | Not available |
Entrez Protein | Entrez Nucleotide | Entrez Gene | UniProt | OMIM | HGNC | HPRD | KEGG |
---|---|---|---|---|---|---|---|
NP_777176 | NM_174751 | 286764 | P18493 | N/A | N/A | N/A | bta:286764 |
* Information From OMIM
Not Available.
* Structure Information
1. Primary Information
Length: 1016 aa
Average Mass: 113.485 kDa
Monoisotopic Mass: 113.415 kDa
2. Domain Information
Annotated Domains: interpro / pfam / smart / prosite
Computationally Assigned Domains (Pfam+HMMER):
domain name | begin | end | score | e-value |
---|---|---|---|---|
PADR1 (NUC008) domain 1. | 20 | 26 | 15.0 | 0.7 |
PADR1 (NUC008) domain 2. | 127 | 148 | 15.0 | 0.1 |
Poly(ADP-ribose) polymerase catalytic domain 1. | 214 | 251 | 13.0 | 0.2 |
Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region 1. | 322 | 359 | 41.0 | 0.3 |
--- cleavage 384 --- | ||||
Poly(ADP-ribose) polymerase, regulatory domain 1. | 395 | 407 | 31.0 | 0.4 |
--- cleavage 480 --- | ||||
--- cleavage 502 --- | ||||
WGR domain 1. | 556 | 632 | 2.0 | 0.2 |
--- cleavage 658 --- | ||||
Bacterial protein of unknown function (DUF948) 1. | 753 | 770 | 52.0 | 0.0 |
Poly(ADP-ribose) polymerase catalytic domain 2. | 799 | 1009 | 1.0 | 0.0 |
3. Sequence Information
Fasta Sequence: SB0065.fasta
Amino Acid Sequence and Secondary Structures (PsiPred):
4. 3D Information
Not Available.
* Cleavage Information
4 [sites] cleaved by Calpain 1
Source Reference: [PubMed ID: 9074620] Buki KG, Bauer PI, Kun E, Isolation and identification of a proteinase from calf thymus that cleaves poly(ADP-ribose) polymerase and histone H1. Biochim Biophys Acta. 1997 Mar 7;1338(1):100-6.
Cleavage sites (±10aa)
[Site 1] SAASAPAAVH384-SGPPDKPLSN
His384 Ser
P10 | P9 | P8 | P7 | P6 | P5 | P4 | P3 | P2 | P1 |
---|---|---|---|---|---|---|---|---|---|
Ser375 | Ala376 | Ala377 | Ser378 | Ala379 | Pro380 | Ala381 | Ala382 | Val383 | His384 |
P1' | P2' | P3' | P4' | P5' | P6' | P7' | P8' | P9' | P10' |
Ser385 | Gly386 | Pro387 | Pro388 | Asp389 | Lys390 | Pro391 | Leu392 | Ser393 | Asn394 |
Sequence conservation (by blast) Sequence conservation (by blast)
Reference peptide (cleaved bond±30 residues) |
---|
KQDRIFPPESSTPVGAAAPPSAASAPAAVHSGPPDKPLSNMKILTLGKLSQNKDEVKATI |
Summary
# | organism | max score | hits | top seq |
---|---|---|---|---|
1 | Bos taurus | 122.00 | 1 | ADP-ribosyltransferase (NAD+) poly (ADP-ribose) p |
2 | N/A | 88.60 | 4 | poly(ADP-ribose) polymerase |
3 | Homo sapiens | 88.60 | 2 | poly (ADP-ribose) polymerase family, member 1 |
4 | ADP-ribose | 87.00 | 8 | PARP1_MOUSE Poly |
5 | Mus musculus | 85.10 | 7 | unnamed protein product |
6 | Rattus norvegicus | 66.60 | 1 | ADP-ribosyltransferase 1 |
7 | Gallus gallus | 63.50 | 1 | poly (ADP-ribose) polymerase family, member 1 |
8 | Tetraodon nigroviridis | 53.50 | 1 | unnamed protein product |
9 | Xenopus laevis | 49.30 | 1 | NAD(+) ADP-ribosyltransferase |
10 | Danio rerio | 46.60 | 1 | Zgc:110092 |
11 | Crimean-Congo hemorrhagic fever virus | 32.00 | 3 | envelope glycoprotein precursor |
Top-ranked sequences
organism | matching |
---|---|
Bos taurus | Query 355 KQDRIFPPESSTPVGAAAPPSAASAPAAVH#SGPPDKPLSNMKILTLGKLSQNKDEVKATI 414 ||||||||||||||||||||||||||||||#|||||||||||||||||||||||||||||| Query 355 KQDRIFPPESSTPVGAAAPPSAASAPAAVH#SGPPDKPLSNMKILTLGKLSQNKDEVKATI 414 |
N/A | Query 355 KQDRIFPPESSTPVGAAAPPSAASAPAAVH#S-GPPDKPLSNMKILTLGKLSQNKDEVKAT 413 |||||||||+| | | ||| |||||||+#| ||||||||||||||||+||||||| Sbjct 352 KQDRIFPPETSASVAATPPPSTASAPAAVN#SSASADKPLSNMKILTLGKLSRNKDEVKAM 411 Query 414 I 414 | Query 414 I 414 |
Homo sapiens | Query 355 KQDRIFPPESSTPVGAAAPPSAASAPAAVH#S-GPPDKPLSNMKILTLGKLSQNKDEVKAT 413 |||||||||+| | | ||| |||||||+#| ||||||||||||||||+||||||| Sbjct 352 KQDRIFPPETSASVAATPPPSTASAPAAVN#SSASADKPLSNMKILTLGKLSRNKDEVKAM 411 Query 414 I 414 | Query 414 I 414 |
ADP-ribose | Query 355 KQDRIFPPESSTPVGAAAPPSAASAPAAVH#S-GPPDKPLSNMKILTLGKLSQNKDEVKAT 413 ||||||||||| |+ | | ||| ||+#| | ||||||||||||||||||||| || Sbjct 352 KQDRIFPPESSAPITVHWPLSVTSAPTAVN#SSAPADKPLSNMKILTLGKLSQNKDEAKAV 411 Query 414 I 414 | Query 414 I 414 |
Mus musculus | Query 355 KQDRIFPPESSTPVGAAAPPSAASAPAAVH#S-GPPDKPLSNMKILTLGKLSQNKDEVKAT 413 ||||||||||| | | | | ||| ||+#| | ||||||||||||||||||||| || Sbjct 353 KQDRIFPPESSAPAPLALPLSVTSAPTAVN#SSAPADKPLSNMKILTLGKLSQNKDEAKAV 412 Query 414 I 414 | Query 414 I 414 |
Rattus norvegicus | Query 355 KQDRIFPPESSTPVGAAAPPSAASAPAAVH#S-GPPDKPLSNMKILTLGKLSQNKDEVKAT 413 ||||+|||||| | | | | ||| ||+#| | ||||||||||||||||||||| || Sbjct 353 KQDRLFPPESSAPAPPAPPVSITSAPTAVN#SSAPADKPLSNMKILTLGKLSQNKDEAKAM 412 Query 414 I 414 | Query 414 I 414 |
Gallus gallus | Query 355 KQDRIFPPESSTPVGAAAPPSAASAPAAVH#SGPPDKPLSNMKILTLGKLSQNKDEVKATI 414 |||||||||++| | +| || |++ #+ | ||||+|||||||||||+||+||| + Sbjct 351 KQDRIFPPEAAT-VNSAPPPPASAPLTETV#TAPQDKPLTNMKILTLGKLSKNKEEVKNIV 409 |
Tetraodon nigroviridis | Query 356 QDRIFP----PESSTPVGAAAPPSAASAPAAVH#SG-PPDKPLSNMKILTLGKLSQNKDEV 410 |+||+| |++ + | | ||+| | + # | ||||||+ ||++ +||||+|||++ Sbjct 93 QNRIYPKEAAPQTVSAVKAEPLASASSVPVGLP#EGAPPDKPLTGMKLVAVGKLSKNKDDL 152 Query 411 KATI 414 || + Sbjct 153 KAAV 156 |
Xenopus laevis | Query 355 KQDRIFPPESS-TPVGAAAPPSAAS-APAAVH#SGPPDKPLSNMKILTLGKLSQNKDEVKA 412 + || ||| ++ ||+ +||+| | #+ | |||+| |+| +||||+|||||| Sbjct 351 RHDRAFPPCAAPTPI---SPPAAPEPKPTVEE#TFPEGKPLTNTKVLLIGKLSKNKDEVKT 407 Query 413 TI 414 | Sbjct 408 LI 409 |
Danio rerio | Query 355 KQDRIFPPESSTPVGAAAPPSAASAPAA---------VH#SGPPDKPLSNMKILTLGKLSQ 405 +|||+|| ++ | || | | ++ || + # | ||||+ ||+| +||||+ Sbjct 344 RQDRVFPKDA--PPAAATPSSGSTTSAATSVSSASKNLT#EAPADKPLTGMKLLAVGKLSK 401 Query 406 NKDEVKATI 414 |||++| + Sbjct 402 NKDDLKKFV 410 |
Crimean-Congo hemorrhagic fever virus | Query 361 PPESSTPVGAAAPPSAASAPAAVH#SGPPDKP 391 | |+||| | || |+| | #+ || | Sbjct 157 PDETSTPSGTGKESSATSSPHPVS#NRPPTPP 187 |
[Site 2] LQELLSTHLL480-SPWGAEVKVE
Leu480 Ser
P10 | P9 | P8 | P7 | P6 | P5 | P4 | P3 | P2 | P1 |
---|---|---|---|---|---|---|---|---|---|
Leu471 | Gln472 | Glu473 | Leu474 | Leu475 | Ser476 | Thr477 | His478 | Leu479 | Leu480 |
P1' | P2' | P3' | P4' | P5' | P6' | P7' | P8' | P9' | P10' |
Ser481 | Pro482 | Trp483 | Gly484 | Ala485 | Glu486 | Val487 | Lys488 | Val489 | Glu490 |
Sequence conservation (by blast) Sequence conservation (by blast)
Reference peptide (cleaved bond±30 residues) |
---|
ANIRVVSEDFLQDISASTKSLQELLSTHLLSPWGAEVKVEPVEAVGPKGKSGAAPSKKSK |
Summary
# | organism | max score | hits | top seq |
---|---|---|---|---|
1 | cattle, Peptide Partial, 607 aa | 120.00 | 1 | NAD+:protein(ADP-ribosyl)-transferase, ADPRT |
2 | Bos taurus | 119.00 | 1 | ADP-ribosyltransferase (NAD+) poly (ADP-ribose) p |
3 | N/A | 102.00 | 5 | poly(ADP-ribose) synthetase |
4 | Homo sapiens | 102.00 | 2 | Poly (ADP-ribose) polymerase family, member 1 |
5 | ADP-ribose | 96.70 | 8 | PARP1_MOUSE Poly |
6 | mice, Peptide Partial, 606 aa | 96.70 | 1 | NAD+:protein(ADP-ribosyl)-transferase, ADPRT |
7 | Mus musculus | 93.20 | 7 | unnamed protein product |
8 | Rattus norvegicus | 92.00 | 1 | ADP-ribosyltransferase 1 |
9 | Tetraodon nigroviridis | 64.70 | 1 | unnamed protein product |
10 | Danio rerio | 62.40 | 1 | Zgc:110092 |
11 | chickens, Peptide Partial, 607 aa | 61.20 | 1 | NAD+:protein(ADP-ribosyl)-transferase, ADPRT |
12 | Gallus gallus | 60.80 | 1 | poly (ADP-ribose) polymerase family, member 1 |
13 | Xenopus laevis | 51.20 | 1 | NAD(+) ADP-ribosyltransferase |
14 | Xenopus, Peptide Partial, 607 aa | 51.20 | 1 | NAD+:protein(ADP-ribosyl)-transferase, ADPRT |
Top-ranked sequences
organism | matching |
---|---|
cattle, Peptide Partial, 607 aa | Query 451 ANIRVVSEDFLQDISASTKSLQELLSTHLL#SPWGAEVKVEPVEAVGPKGKSGAAPSKKSK 510 ||||||||||||||||||||||||||||||#|||||||||||||||||||||||||||||| Query 451 ANIRVVSEDFLQDISASTKSLQELLSTHLL#SPWGAEVKVEPVEAVGPKGKSGAAPSKKSK 510 |
Bos taurus | Query 451 ANIRVVSEDFLQDISASTKSLQELLSTHLL#SPWGAEVKVEPVEAVGPKGKSGAAPSKKSK 510 ||||||||||||||||||||||||||||||#|||||||||||||||||||||||||||||| Query 451 ANIRVVSEDFLQDISASTKSLQELLSTHLL#SPWGAEVKVEPVEAVGPKGKSGAAPSKKSK 510 |
N/A | Query 451 ANIRVVSEDFLQDISASTKSLQELLSTHLL#SPWGAEVKVEPVEAVGPKGKSGAAPSKKSK 510 |||||||||||||+|||||||||| |+|#|||||||| |||| | |+|||||| ||||| Sbjct 449 ANIRVVSEDFLQDVSASTKSLQELFLAHIL#SPWGAEVKAEPVEVVAPRGKSGAALSKKSK 508 |
Homo sapiens | Query 451 ANIRVVSEDFLQDISASTKSLQELLSTHLL#SPWGAEVKVEPVEAVGPKGKSGAAPSKKSK 510 |||||||||||||+|||||||||| |+|#|||||||| |||| | |+|||||| ||||| Sbjct 449 ANIRVVSEDFLQDVSASTKSLQELFLAHIL#SPWGAEVKAEPVEVVAPRGKSGAALSKKSK 508 |
ADP-ribose | Query 451 ANIRVVSEDFLQDISASTKSLQELLSTHLL#SPWGAEVKVEPVEAVGPKGKSGAAPSKKSK 510 |||||||||||||+||||||||+||| | |#|||||||| || | | |+||| |||||||| Sbjct 449 ANIRVVSEDFLQDVSASTKSLQDLLSAHSL#SPWGAEVKAEPGEVVAPRGKS-AAPSKKSK 507 |
mice, Peptide Partial, 606 aa | Query 451 ANIRVVSEDFLQDISASTKSLQELLSTHLL#SPWGAEVKVEPVEAVGPKGKSGAAPSKKSK 510 |||||||||||||+||||||||+||| | |#|||||||| || | | |+||| |||||||| Sbjct 42 ANIRVVSEDFLQDVSASTKSLQDLLSAHSL#SPWGAEVKAEPGEVVAPRGKS-AAPSKKSK 100 |
Mus musculus | Query 451 ANIRVVSEDFLQDISASTKSLQELLSTHLL#SPWGAEVKVEPVEAVGPKGKSGAAPSKKSK 510 ||+||| ||||||+|||||||||||| | |#| |||||| || | | ||||| |||||||| Sbjct 450 ANVRVVCEDFLQDVSASTKSLQELLSAHSL#SSWGAEVKAEPGEVVAPKGKS-AAPSKKSK 508 |
Rattus norvegicus | Query 451 ANIRVVSEDFLQDISASTKSLQELLSTHLL#SPWGAEVKVEPVEAVGPKGKSGAAPSKKSK 510 ||+||| ||||||+||| |||||||| | |#| ||||||||| | | ||||| |||||||| Sbjct 450 ANVRVVCEDFLQDVSASAKSLQELLSAHSL#SSWGAEVKVEPGEVVVPKGKS-AAPSKKSK 508 |
Tetraodon nigroviridis | Query 451 ANIRVVSEDFLQDISASTKSLQELLSTHLL#SPWGAEVKVEPVEAVGPKGKSGAAPSKKS 509 | +|||||||| || +| |+||||+| | +#|||||||||| +| |||| +| + Sbjct 193 AGVRVVSEDFLTDIKSSGKALQELVSLHAI#SPWGAEVKVE-TQAQPMASKSGAMAAKST 250 |
Danio rerio | Query 451 ANIRVVSEDFLQDISASTKSLQELLSTHLL#SPWGAEVKVEPVEAVGPKGKSGAAPSK 507 | +|||++||| || | |+||||+| | +#|||||||||| | +|| || Sbjct 447 AGVRVVADDFLTDIKESGKALQELISLHAI#SPWGAEVKVEAPAAAAATKSTGAHSSK 503 |
chickens, Peptide Partial, 607 aa | Query 451 ANIRVVSEDFLQDISASTKSLQELLSTHLL#SPWGAEVKVEPVEAVGPKGKSGAAPSKKS 509 | +|||||+||+|+ +| | ||||| | +#|||||||| | | | || + || Sbjct 42 AKVRVVSEEFLKDVKSSNKGFQELLSLHAI#SPWGAEVKTEHQE-VAVDGKCSKPANMKS 99 |
Gallus gallus | Query 451 ANIRVVSEDFLQDISASTKSLQELLSTHLL#SPWGAEVKVEPVEAVGPKGKSGAAPSKKS 509 | +|||||+||+|+ +| | ||||| | +#|||||||| | | | || + || Sbjct 446 AKVRVVSEEFLKDVKSSNKGFQELLSLHAI#SPWGAEVKTEHQE-VAVDGKCSKPANMKS 503 |
Xenopus laevis | Query 451 ANIRVVSEDFLQDISASTKSLQELLSTHLL#SPWGAEVKVEPVEAVGPKGKSGAAPSKKS 509 ||+||||+|||+++ | ||+||||| +#| ||||+| | |+ + || | | Sbjct 446 ANVRVVSDDFLKEVE-SGKSVQELLSQFGI#SSWGAEIKQEAVQPTEKQPSSGPVAGKSS 503 |
Xenopus, Peptide Partial, 607 aa | Query 451 ANIRVVSEDFLQDISASTKSLQELLSTHLL#SPWGAEVKVEPVEAVGPKGKSGAAPSKKS 509 ||+||||+|||+++ | ||+||||| +#| ||||+| | |+ + || | | Sbjct 42 ANVRVVSDDFLKEV-FSGKSVQELLSQFGI#SSWGAEIKQEAVQPTEKQPSSGPVAGKSS 99 |
[Site 3] EAVGPKGKSG502-AAPSKKSKGP
Gly502 Ala
P10 | P9 | P8 | P7 | P6 | P5 | P4 | P3 | P2 | P1 |
---|---|---|---|---|---|---|---|---|---|
Glu493 | Ala494 | Val495 | Gly496 | Pro497 | Lys498 | Gly499 | Lys500 | Ser501 | Gly502 |
P1' | P2' | P3' | P4' | P5' | P6' | P7' | P8' | P9' | P10' |
Ala503 | Ala504 | Pro505 | Ser506 | Lys507 | Lys508 | Ser509 | Lys510 | Gly511 | Pro512 |
Sequence conservation (by blast) Sequence conservation (by blast)
Reference peptide (cleaved bond±30 residues) |
---|
ELLSTHLLSPWGAEVKVEPVEAVGPKGKSGAAPSKKSKGPVKEEGTNKSEKRMKLTLKGG |
Summary
# | organism | max score | hits | top seq |
---|---|---|---|---|
1 | cattle, Peptide Partial, 607 aa | 119.00 | 1 | NAD+:protein(ADP-ribosyl)-transferase, ADPRT |
2 | Bos taurus | 118.00 | 1 | ADP-ribosyltransferase (NAD+) poly (ADP-ribose) p |
3 | N/A | 98.60 | 4 | poly(ADP-ribose) polymerase |
4 | Homo sapiens | 98.20 | 2 | poly (ADP-ribose) polymerase family, member 1 |
5 | ADP-ribose | 95.90 | 8 | PREDICTED: similar to Poly |
6 | Rattus norvegicus | 91.70 | 1 | ADP-ribosyltransferase 1 |
7 | Mus musculus | 90.50 | 7 | poly (ADP-ribose) polymerase family, member 1 |
8 | mice, Peptide Partial, 606 aa | 90.10 | 1 | NAD+:protein(ADP-ribosyl)-transferase, ADPRT |
9 | Gallus gallus | 59.70 | 1 | poly (ADP-ribose) polymerase family, member 1 |
10 | chickens, Peptide Partial, 607 aa | 59.70 | 1 | NAD+:protein(ADP-ribosyl)-transferase, ADPRT |
11 | Danio rerio | 53.90 | 1 | Zgc:110092 |
12 | Xenopus laevis | 52.40 | 1 | NAD(+) ADP-ribosyltransferase |
13 | Xenopus, Peptide Partial, 607 aa | 52.40 | 1 | NAD+:protein(ADP-ribosyl)-transferase, ADPRT |
14 | Tetraodon nigroviridis | 50.40 | 1 | unnamed protein product |
Top-ranked sequences
organism | matching |
---|---|
cattle, Peptide Partial, 607 aa | Query 473 ELLSTHLLSPWGAEVKVEPVEAVGPKGKSG#AAPSKKSKGPVKEEGTNKSEKRMKLTLKGG 532 ||||||||||||||||||||||||||||||#|||||||||||||||||||||||||||||| Query 473 ELLSTHLLSPWGAEVKVEPVEAVGPKGKSG#AAPSKKSKGPVKEEGTNKSEKRMKLTLKGG 532 |
Bos taurus | Query 473 ELLSTHLLSPWGAEVKVEPVEAVGPKGKSG#AAPSKKSKGPVKEEGTNKSEKRMKLTLKGG 532 ||||||||||||||||||||||||||||||#|||||||||||||||||||||||||||||| Query 473 ELLSTHLLSPWGAEVKVEPVEAVGPKGKSG#AAPSKKSKGPVKEEGTNKSEKRMKLTLKGG 532 |
N/A | Query 473 ELLSTHLLSPWGAEVKVEPVEAVGPKGKSG#AAPSKKSKGPVKEEGTNKSEKRMKLTLKGG 532 || |+||||||||| |||| | |+||||#|| |||||| ||||| |||||||||||||| Sbjct 31 ELFLAHILSPWGAEVKAEPVEVVAPRGKSG#AALSKKSKGQVKEEGINKSEKRMKLTLKGG 90 |
Homo sapiens | Query 473 ELLSTHLLSPWGAEVKVEPVEAVGPKGKSG#AAPSKKSKGPVKEEGTNKSEKRMKLTLKGG 532 || |+||||||||| |||| | |+||||#|| |||||| ||||| |||||||||||||| Sbjct 471 ELFLAHILSPWGAEVKAEPVEVVAPRGKSG#AALSKKSKGQVKEEGINKSEKRMKLTLKGG 530 |
ADP-ribose | Query 473 ELLSTHLLSPWGAEVKVEPVEAVGPKGKSG#AAPSKKSKGPVKEEGTNKSEKRMKLTLKGG 532 +||| |+|+||||||| || | || |||#|| |||||||||||| |||||||||||||| Sbjct 438 DLLSAHVLAPWGAEVKAEPAEPAAPKAKSG#AALSKKSKGPVKEEGVNKSEKRMKLTLKGG 497 |
Rattus norvegicus | Query 473 ELLSTHLLSPWGAEVKVEPVEAVGPKGKSG#AAPSKKSKGPVKEEGTNKSEKRMKLTLKGG 532 |||| | || ||||||||| | | ||||| #||||||||| ||||| |||||||||||||| Sbjct 472 ELLSAHSLSSWGAEVKVEPGEVVVPKGKS-#AAPSKKSKGAVKEEGVNKSEKRMKLTLKGG 530 |
Mus musculus | Query 473 ELLSTHLLSPWGAEVKVEPVEAVGPKGKSG#AAPSKKSKGPVKEEGTNKSEKRMKLTLKGG 532 |||| | || |||||| || | | ||||| #||||||||| ||||| |||||||||||||| Sbjct 472 ELLSAHSLSSWGAEVKAEPGEVVAPKGKS-#AAPSKKSKGAVKEEGVNKSEKRMKLTLKGG 530 |
mice, Peptide Partial, 606 aa | Query 473 ELLSTHLLSPWGAEVKVEPVEAVGPKGKSG#AAPSKKSKGPVKEEGTNKSEKRMKLTLKGG 532 +||| | ||||||||| || | | |+||| #||||||||| |||| |||||||||||||| Sbjct 64 DLLSAHSLSPWGAEVKAEPGEVVAPRGKS-#AAPSKKSKGCFKEEGVNKSEKRMKLTLKGG 122 |
Gallus gallus | Query 473 ELLSTHLLSPWGAEVKVEPVEAVGPKGKSG#AAPSKKSKGPVKEE-GTNKSEKRMKLTLKG 531 |||| | +|||||||| | | | || # + || | |||| | +||||+||||+|| Sbjct 468 ELLSLHAISPWGAEVKTEHQE-VAVDGKCS#KPANMKSAGKVKEEQGPSKSEKKMKLTVKG 526 Query 532 G 532 | Query 532 G 532 |
chickens, Peptide Partial, 607 aa | Query 473 ELLSTHLLSPWGAEVKVEPVEAVGPKGKSG#AAPSKKSKGPVKEE-GTNKSEKRMKLTLKG 531 |||| | +|||||||| | | | || # + || | |||| | +||||+||||+|| Sbjct 64 ELLSLHAISPWGAEVKTEHQE-VAVDGKCS#KPANMKSAGKVKEEQGPSKSEKKMKLTVKG 122 Query 532 G 532 | Query 532 G 532 |
Danio rerio | Query 473 ELLSTHLLSPWGAEVKVEPVEAVGPKGKSG#AAPSKKSKGPVKEEGTNKSEKRMKLTLKGG 532 ||+| | +|||||||||| | || # | | || | |||| |+||||+||| Sbjct 469 ELISLHAISPWGAEVKVEA-PAAAAATKST#GAHSSKSTGKVKEEEGGSKSKKMKLTVKGG 527 |
Xenopus laevis | Query 473 ELLSTHLLSPWGAEVKVEPVEAVGPKGKSG#AAPSKKSKGPVKEE-GTNKSEKRMKLTLKG 531 |||| +| ||||+| | |+ + ||# + || | |||| |+|||||+||||+|| Sbjct 467 ELLSQFGISSWGAEIKQEAVQPTEKQPSSG#PV-AGKSSGKVKEEKGSNKSEKKMKLTVKG 525 Query 532 G 532 | Query 532 G 532 |
Xenopus, Peptide Partial, 607 aa | Query 473 ELLSTHLLSPWGAEVKVEPVEAVGPKGKSG#AAPSKKSKGPVKEE-GTNKSEKRMKLTLKG 531 |||| +| ||||+| | |+ + ||# | | | |||| |+|||||+||||+|| Sbjct 63 ELLSQFGISSWGAEIKQEAVQPTEKQPSSG#PVAGKSS-GKVKEEKGSNKSEKKMKLTVKG 121 Query 532 G 532 | Query 532 G 532 |
Tetraodon nigroviridis | Query 473 ELLSTHLLSPWGAEVKVEPVEAVGPKGKSG#AAPSKKSKGPVKEEGTNKSEKRMKLTLKGG 532 ||+| | +|||||||||| +| |||#| + || | |||+ |+||||+||| Sbjct 215 ELVSLHAISPWGAEVKVE-TQAQPMASKSG#AMAA-KSTGRVKEQEGGGKSKKMKLTVKGG 272 |
[Site 4] QDEEAVKKLT658-VNPGTKSKLP
Thr658 Val
iTraq-117 Signal 1517.9 () for KKLTVNPGTK
P10 | P9 | P8 | P7 | P6 | P5 | P4 | P3 | P2 | P1 |
---|---|---|---|---|---|---|---|---|---|
Gln649 | Asp650 | Glu651 | Glu652 | Ala653 | Val654 | Lys655 | Lys656 | Leu657 | Thr658 |
P1' | P2' | P3' | P4' | P5' | P6' | P7' | P8' | P9' | P10' |
Val659 | Asn660 | Pro661 | Gly662 | Thr663 | Lys664 | Ser665 | Lys666 | Leu667 | Pro668 |
Sequence conservation (by blast) Sequence conservation (by blast)
Reference peptide (cleaved bond±30 residues) |
---|
HSKNFTKHPKKFYPLEIDYGQDEEAVKKLTVNPGTKSKLPKPVQNLIKMIFDVESMKKAM |
Summary
# | organism | max score | hits | top seq |
---|---|---|---|---|
1 | Bos taurus | 125.00 | 2 | ADP-ribosyltransferase (NAD+) poly (ADP-ribose) p |
2 | cattle, Peptide Partial, 607 aa | 125.00 | 1 | NAD+:protein(ADP-ribosyl)-transferase, ADPRT |
3 | N/A | 122.00 | 9 | poly(ADP-ribose) polymerase |
4 | Homo sapiens | 122.00 | 2 | poly (ADP-ribose) polymerase family, member 1 |
5 | ADP-ribose | 120.00 | 12 | PREDICTED: similar to Poly |
6 | Mus musculus | 115.00 | 11 | unnamed protein product |
7 | Rattus norvegicus | 113.00 | 2 | ADP-ribosyltransferase 1 |
8 | mice, Peptide Partial, 606 aa | 113.00 | 1 | NAD+:protein(ADP-ribosyl)-transferase, ADPRT |
9 | chickens, Peptide Partial, 607 aa | 113.00 | 1 | NAD+:protein(ADP-ribosyl)-transferase, ADPRT |
10 | Gallus gallus | 113.00 | 1 | poly (ADP-ribose) polymerase family, member 1 |
11 | Tetraodon nigroviridis | 105.00 | 2 | unnamed protein product |
12 | Xenopus laevis | 103.00 | 3 | NAD(+) ADP-ribosyltransferase |
13 | Xenopus, Peptide Partial, 607 aa | 103.00 | 1 | NAD+:protein(ADP-ribosyl)-transferase, ADPRT |
14 | Danio rerio | 101.00 | 2 | Zgc:110092 |
15 | Arabidopsis thaliana | 49.30 | 3 | putative poly (ADP-ribose) polymerase |
16 | Drosophila melanogaster | 49.30 | 3 | LD31274p |
17 | Drosophila, Peptide Partial, 593 aa | 49.30 | 1 | NAD+:protein(ADP-ribosyl)-transferase, ADPRT |
18 | Oryza sativa (japonica cultivar-group) | 46.20 | 1 | Os07g0413700 |
19 | Caenorhabditis elegans | 45.80 | 2 | Poly(ADP-ribose) Metabolism Enzyme family member |
20 | Zea mays | 45.10 | 1 | poly(ADP-ribose) polymerase |
21 | Caenorhabditis briggsae AF16 | 45.10 | 1 | Hypothetical protein CBG04221 |
22 | Schistosoma japonicum | 43.50 | 1 | SJCHGC03992 protein |
23 | Oryza sativa Japonica Group | 35.00 | 1 | putative poly(ADP-ribose) polymerase |
24 | Rattus norvegicus | 33.50 | 1 | poly (ADP-ribose) polymerase family, member 2 |
25 | Dictyostelium discoideum AX4 | 32.70 | 3 | poly(ADP-ribosyl)transferase |
26 | Dictyostelium discoideum | 32.70 | 2 | NAD(+) ADP-ribosyltransferase-1B |
27 | Dictyostelium discoideum, Peptide Partial, 612 aa | 31.60 | 1 | NAD+:protein(ADP-ribosyl)-transferase, ADPRT {EC |
28 | Aspergillus nidulans FGSC A4 | 30.80 | 1 | hypothetical protein AN3129.2 |
29 | Emericella nidulans | 30.80 | 1 | poly(ADP)-ribose polymerase |
30 | Methanosphaera stadtmanae DSM 3091 | 30.00 | 1 | riboflavin synthase |
Top-ranked sequences
organism | matching |
---|---|
Bos taurus | Query 629 HSKNFTKHPKKFYPLEIDYGQDEEAVKKLT#VNPGTKSKLPKPVQNLIKMIFDVESMKKAM 688 ||||||||||||||||||||||||||||||#|||||||||||||||||||||||||||||| Query 629 HSKNFTKHPKKFYPLEIDYGQDEEAVKKLT#VNPGTKSKLPKPVQNLIKMIFDVESMKKAM 688 |
cattle, Peptide Partial, 607 aa | Query 629 HSKNFTKHPKKFYPLEIDYGQDEEAVKKLT#VNPGTKSKLPKPVQNLIKMIFDVESMKKAM 688 ||||||||||||||||||||||||||||||#|||||||||||||||||||||||||||||| Query 629 HSKNFTKHPKKFYPLEIDYGQDEEAVKKLT#VNPGTKSKLPKPVQNLIKMIFDVESMKKAM 688 |
N/A | Query 629 HSKNFTKHPKKFYPLEIDYGQDEEAVKKLT#VNPGTKSKLPKPVQNLIKMIFDVESMKKAM 688 |||||||+||||||||||||||||||||||#||||||||||||||+||||||||||||||| Sbjct 627 HSKNFTKYPKKFYPLEIDYGQDEEAVKKLT#VNPGTKSKLPKPVQDLIKMIFDVESMKKAM 686 |
Homo sapiens | Query 629 HSKNFTKHPKKFYPLEIDYGQDEEAVKKLT#VNPGTKSKLPKPVQNLIKMIFDVESMKKAM 688 |||||||+||||||||||||||||||||||#||||||||||||||+||||||||||||||| Sbjct 627 HSKNFTKYPKKFYPLEIDYGQDEEAVKKLT#VNPGTKSKLPKPVQDLIKMIFDVESMKKAM 686 |
ADP-ribose | Query 629 HSKNFTKHPKKFYPLEIDYGQDEEAVKKLT#VNPGTKSKLPKPVQNLIKMIFDVESMKKAM 688 |+||||||||||||||||||||||||||||#| ||||||||||||+||||||||||||||| Sbjct 594 HAKNFTKHPKKFYPLEIDYGQDEEAVKKLT#VKPGTKSKLPKPVQDLIKMIFDVESMKKAM 653 |
Mus musculus | Query 629 HSKNFTKHPKKFYPLEIDYGQDEEAVKKLT#VNPGTKSKLPKPVQNLIKMIFDVESMKKAM 688 |||||||+||||||||||||||||||||||#| |||||||||||| |+ |||||||||||+ Sbjct 627 HSKNFTKYPKKFYPLEIDYGQDEEAVKKLT#VKPGTKSKLPKPVQELVGMIFDVESMKKAL 686 |
Rattus norvegicus | Query 629 HSKNFTKHPKKFYPLEIDYGQDEEAVKKLT#VNPGTKSKLPKPVQNLIKMIFDVESMKKAM 688 |||||||+||||||||||||||||||||| #| |||||||||||| |+ |||||||||||+ Sbjct 627 HSKNFTKYPKKFYPLEIDYGQDEEAVKKLA#VKPGTKSKLPKPVQELVGMIFDVESMKKAL 686 |
mice, Peptide Partial, 606 aa | Query 629 HSKNFTKHPKKFYPLEIDYGQDEEAVKKLT#VNPGTKSKLPKPVQNLIKMIFDVESMKKAM 688 |||||||+||||||||||||||||||||||#| |||||||||||| |+ |||||+|||||+ Sbjct 219 HSKNFTKYPKKFYPLEIDYGQDEEAVKKLT#VKPGTKSKLPKPVQELVGMIFDVDSMKKAL 278 |
chickens, Peptide Partial, 607 aa | Query 629 HSKNFTKHPKKFYPLEIDYGQDEEAVKKLT#VNPGTKSKLPKPVQNLIKMIFDVESMKKAM 688 |||||||+||||||||||||||||||+|||#|+ |||||| ||+|+||||||||||||||| Sbjct 220 HSKNFTKYPKKFYPLEIDYGQDEEAVRKLT#VSAGTKSKLAKPIQDLIKMIFDVESMKKAM 279 |
Gallus gallus | Query 629 HSKNFTKHPKKFYPLEIDYGQDEEAVKKLT#VNPGTKSKLPKPVQNLIKMIFDVESMKKAM 688 |||||||+||||||||||||||||||+|||#|+ |||||| ||+|+||||||||||||||| Sbjct 624 HSKNFTKYPKKFYPLEIDYGQDEEAVRKLT#VSAGTKSKLAKPIQDLIKMIFDVESMKKAM 683 |
Tetraodon nigroviridis | Query 630 SKNFTKHPKKFYPLEIDYGQDEEAVKKLT#VNPGTKSKLPKPVQNLIKMIFDVESMKKAM 688 | ||||+| ||||||||||||||||||||# |||||| |||| ||||||||||||||| Sbjct 370 SSNFTKYPNKFYPLEIDYGQDEEAVKKLT#ATAGTKSKLAKPVQELIKMIFDVESMKKAM 428 |
Xenopus laevis | Query 629 HSKNFTKHPKKFYPLEIDYGQDEEAVKKLT#VNPGTKSKLPKPVQNLIKMIFDVESMKKAM 688 || ||||+|||||||||||||+|+ ||||+#| |||||| |||| |||+||||||||||| Sbjct 623 HSPNFTKYPKKFYPLEIDYGQEEDVVKKLS#VGAGTKSKLAKPVQELIKLIFDVESMKKAM 682 |
Xenopus, Peptide Partial, 607 aa | Query 629 HSKNFTKHPKKFYPLEIDYGQDEEAVKKLT#VNPGTKSKLPKPVQNLIKMIFDVESMKKAM 688 || ||||+|||||||||||||+|+ ||||+#| |||||| |||| |||+||||||||||| Sbjct 219 HSPNFTKYPKKFYPLEIDYGQEEDVVKKLS#VGAGTKSKLAKPVQELIKLIFDVESMKKAM 278 |
Danio rerio | Query 630 SKNFTKHPKKFYPLEIDYGQDEEAVKKLT#VNPGTKSKLPKPVQNLIKMIFDVESMKKAM 688 | ||||+| ||||||||||||||||||||# + | ||+| ||||+||+|||||||||||| Sbjct 625 SSNFTKYPNKFYPLEIDYGQDEEAVKKLT#QSAGAKSQLEKPVQDLIRMIFDVESMKKAM 683 |
Arabidopsis thaliana | Query 632 NFTKHPKKFYPLEIDYGQDEEAVKKLT#VNPGTKSKLPKPVQNLIKMIFDVESMKKAM 688 || | | || ||+|||| +++ || # | | | + |+||+||||+ + || Sbjct 629 NFQKQPGKFLPLDIDYGVNKQVAKKEP#FQ--TSSNLAPSLIELMKMLFDVETYRSAM 683 |
Drosophila melanogaster | Query 632 NFTKHPKKFYPLEIDYGQDEEAVKKLT#VNPGTKSKLPKPVQNLIKMIFDVESMKKAM 688 || | + ||+|| | |++ || +# ||| ||||||+|||++|| | + Sbjct 177 NFVKRTGRMYPIEIQYDDDQKLVKHES#--HFFTSKLEISVQNLIKLIFDIDSMNKTL 231 |
Drosophila, Peptide Partial, 593 aa | Query 632 NFTKHPKKFYPLEIDYGQDEEAVKKLT#VNPGTKSKLPKPVQNLIKMIFDVESMKKAM 688 || | + ||+|| | |++ || +# ||| ||||||+|||++|| | + Sbjct 213 NFVKRTGRMYPIEIQYDDDQKLVKHES#--HFFTSKLEISVQNLIKLIFDIDSMNKTL 267 |
Oryza sativa (japonica cultivar-group) | Query 632 NFTKHPKKFYPLEIDYGQDEEAVKKLT#VNPGTKSKLPKPVQNLIKMIFDVESMKKAM 688 || | | |||||+|||| + |+ #++ || || + |+ |+|++|+ + || Sbjct 596 NFQKQPGKFYPLDIDYGV-RQGPKRKD#IDK-MKSSLPPQLLELMNMLFNIETYRAAM 650 |
Caenorhabditis elegans | Query 629 HSKNFTKHPKKFYPLEIDYGQDEEAVKKLT#VNPGTKSKLPKPVQNLIKMIFDVESMKKAM 688 + |+| | | | +| || + + + #+ ||+|+ ||| |+ ++ |||||+|| |+ Sbjct 552 YRKHFRKMPGMFSYVETDYSEFAQ-ITDTE#ITPGSKTLLPKSVKEVVMSIFDVENMKSAL 610 |
Zea mays | Query 632 NFTKHPKKFYPLEIDYGQDEEAVKKLT#VNPGTKSKLPKPVQNLIKMIFDVESMKKAM 688 || | | +||||++||| ++| |+ #++ || | + |+||+|+||+ + || Sbjct 588 NFRKQPGRFYPLDVDYGV-KKAPKRKD#ISE-MKSSLAPQLLELMKMLFNVETYRAAM 642 |
Caenorhabditis briggsae AF16 | Query 631 KNFTKHPKKFYPLEIDYGQDEEAVKKLT#VNPGTKSKLPKPVQNLIKMIFDVESMKKAM 688 |+| | | | +| || + ++ +|+ #+ ||+++ ||+ |+ ++ |||+|+|| |+ Sbjct 545 KHFRKMPGAFSFVETDYSEFDQ-LKEQD#IIPGSRTLLPRAVKEIVMSIFDIENMKSAL 601 |
Schistosoma japonicum | Query 633 FTKHPKKFYPLEIDYG-QDEEAVKKLT#VNPGTKSKLPKPVQNLIKMIFDVESMKKAM 688 | || |+ +||||| ||| + # ||+|| || |+++| |+++|++ | Sbjct 134 FIKHKGKYDLVEIDYGVQDENVTIETK#KTEEIKSRLPVAVQVLMQLICDMDNMEQVM 190 |
Oryza sativa Japonica Group | Query 631 KNFTKHPKKFYPLEIDYGQ-DEEAVKKLT#VNPGT----KSKLPKPVQNLIKMIFDVESMK 685 |+| + +|+ ||+|||+ | | || #|+| | ++|| + + | +| ++ || Sbjct 245 KSFECYARKYTWLEMDYGEADRETNKK--#VSPSTDQIKETKLETRIASFISLICNISMMK 302 Query 686 KAM 688 + | Sbjct 303 QQM 305 |
Rattus norvegicus | Query 631 KNFTKHPKKFYPLEIDYGQDEEAVKKLT#VNPGTK--SKLPKPVQNLIKMIFDVESMKKAM 688 +|| | | |+ |++|| | | # +| |+| || |+|+| +|++|++ | Sbjct 171 ENFEKVPGKYDMLQMDYAASTEDENKTK#QEETSKPESQLDLRVQELLKLICNVQTMEEMM 230 |
Dictyostelium discoideum AX4 | Query 644 EIDYGQDEEAVKKLT#VNPGTK-SKLPKPVQNLIKMIFDVESMKKAM 688 | | | | + # || ||| +|||+|+ +|| | |||++ Sbjct 412 EFSSGGDNEVEAPIV#APVNTKPSKLLQPVQSLVNTLFDSELMKKSL 457 |
Dictyostelium discoideum | Query 644 EIDYGQDEEAVKKLT#VNPGTK-SKLPKPVQNLIKMIFDVESMKKAM 688 | | | | + # || ||| +|||+|+ +|| | |||++ Sbjct 412 EFSSGGDNEVEAPIV#APVNTKPSKLLQPVQSLVNTLFDSELMKKSL 457 |
Dictyostelium discoideum, Peptide Partial, 612 aa | Query 632 NFTKHPKKFYPLEIDYGQDEE-----------AVKKLT#VNPGTKSKLPKPVQNLIKMIFD 680 || | |+ +|+|| | + | #| + | + || |+|+||| Sbjct 228 NFKKVAGKYDMIELDYSTDSKPKNGASTTATTTTTKKV#VEHKKECSLDERVQELVKLIFD 287 Query 681 VESMKKAM 688 |+ |++ | Sbjct 288 VKMMERTM 295 |
Aspergillus nidulans FGSC A4 | Query 649 QDEEAVKKLT#VNPGT--KSKLPKPVQNLIKMIFD 680 +||++ || # | |||| ||||+| ||+ Sbjct 288 EDEKSDNKLV#KQPSNIPASKLPAPVQNVISFIFN 321 |
Emericella nidulans | Query 649 QDEEAVKKLT#VNPGT--KSKLPKPVQNLIKMIFD 680 +||++ || # | |||| ||||+| ||+ Sbjct 288 EDEKSDNKLV#KQPSNIPASKLPAPVQNVISFIFN 321 |
Methanosphaera stadtmanae DSM 3091 | Query 646 DYGQDEEAVKKLT#VNPGTKSKLPKPVQNLIKMIFDVESMKK 686 | |+||+ +|+| # | |+ ||+||+| |+||| Sbjct 103 DEGKDEKDLKELA#YNRATQH-----ADNLVKMLFKPEAMKK 138 |
* References
[PubMed ID: 23272074] Wu B, Liu HL, Zhang S, Dong XR, Wu G, Lack of an association between two BER gene polymorphisms and breast cancer risk: a meta-analysis. PLoS One. 2012;7(12):e50857. doi: 10.1371/journal.pone.0050857. Epub 2012 Dec 14.
[PubMed ID: 20514865] ... Khodyreva SN, Ilina ES, Kutuzov MM, Sukhanova MV, Lavrik OI, Poly(ADP-ribose) polymerase 1 interaction with apurinic/apyrimidinic sites. Dokl Biochem Biophys. 2010 Mar-Apr;431:69-72.
[PubMed ID: 19393038] ... Zimin AV, Delcher AL, Florea L, Kelley DR, Schatz MC, Puiu D, Hanrahan F, Pertea G, Van Tassell CP, Sonstegard TS, Marcais G, Roberts M, Subramanian P, Yorke JA, Salzberg SL, A whole-genome assembly of the domestic cow, Bos taurus. Genome Biol. 2009;10(4):R42. doi: 10.1186/gb-2009-10-4-r42. Epub 2009 Apr 24.
[PubMed ID: 15389540] ... Caldini R, Barletta E, Del Rosso M, Giovannelli L, Chevanne M, FGF2-mediated upregulation of urokinase-type plasminogen activator expression requires a MAP-kinase dependent activation of poly(ADP-ribose) polymerase. J Cell Physiol. 2005 Jan;202(1):125-34.
[PubMed ID: 2119324] ... Saito I, Hatakeyama K, Kido T, Ohkubo H, Nakanishi S, Ueda K, Cloning of a full-length cDNA encoding bovine thymus poly(ADP-ribose) synthetase: evolutionarily conserved segments and their potential functions. Gene. 1990 Jun 15;90(2):249-54.
[PubMed ID: 2450019] ... Taniguchi T, Yamauchi K, Yamamoto T, Toyoshima K, Harada N, Tanaka H, Takahashi S, Yamamoto H, Fujimoto S, Depression in gene expression for poly(ADP-ribose) synthetase during the interferon-gamma-induced activation process of murine macrophage tumor cells. Eur J Biochem. 1988 Feb 1;171(3):571-5.