logo CaMPDB: Calpain for Modulatory Proteolysis Database

SB0065 : ADP-ribosyltransferase (NAD+) poly(ADP-ribose) polymerase

[ CaMP Format ]

* Basic Information

OrganismBos taurus (cattle)
Protein Namespoly [ADP-ribose] polymerase 1 [Bos taurus]; poly [ADP-ribose] polymerase 1; poly (ADP-ribose) polymerase family, member 1; poly(ADP-ribose) synthetase; ADP-ribosyltransferase (NAD+) poly (ADP-ribose) polymerase); PARP-1; ADP-ribosyltransferase diphtheria toxin-like 1; poly[ADP-ribose] synthetase 1; NAD(+) ADP-ribosyltransferase 1; ADPRT 1; poly[ADP-ribose] synthase 1; Poly [ADP-ribose] polymerase 1; 2.4.2.30; ARTD1; Poly[ADP-ribose] synthase 1
Gene NamesPARP1; ADPRT; poly (ADP-ribose) polymerase 1
Gene Locus16; chromosome 16
GO FunctionNot available
Entrez Protein Entrez Nucleotide Entrez Gene UniProt OMIM HGNC HPRD KEGG
NP_777176 NM_174751 286764 P18493 N/A N/A N/A bta:286764

* Information From OMIM

Not Available.

* Structure Information

1. Primary Information

Length: 1016 aa

Average Mass: 113.485 kDa

Monoisotopic Mass: 113.415 kDa

2. Domain Information

Annotated Domains: interpro / pfam / smart / prosite

Computationally Assigned Domains (Pfam+HMMER):

domain namebeginendscoree-value
PADR1 (NUC008) domain 1. 202615.00.7
PADR1 (NUC008) domain 2. 12714815.00.1
Poly(ADP-ribose) polymerase catalytic domain 1. 21425113.00.2
Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region 1. 32235941.00.3
--- cleavage 384 ---
Poly(ADP-ribose) polymerase, regulatory domain 1. 39540731.00.4
--- cleavage 480 ---
--- cleavage 502 ---
WGR domain 1. 5566322.00.2
--- cleavage 658 ---
Bacterial protein of unknown function (DUF948) 1. 75377052.00.0
Poly(ADP-ribose) polymerase catalytic domain 2. 79910091.00.0

3. Sequence Information

Fasta Sequence: SB0065.fasta

Amino Acid Sequence and Secondary Structures (PsiPred):

4. 3D Information

Not Available.

* Cleavage Information

4 [sites] cleaved by Calpain 1

Source Reference: [PubMed ID: 9074620] Buki KG, Bauer PI, Kun E, Isolation and identification of a proteinase from calf thymus that cleaves poly(ADP-ribose) polymerase and histone H1. Biochim Biophys Acta. 1997 Mar 7;1338(1):100-6.

Cleavage sites (±10aa)

[Site 1] SAASAPAAVH384-SGPPDKPLSN

His384 Ser

P10 P9 P8 P7 P6 P5 P4 P3 P2 P1
Ser375Ala376Ala377Ser378Ala379Pro380Ala381Ala382Val383His384
P1' P2' P3' P4' P5' P6' P7' P8' P9' P10'
Ser385Gly386Pro387Pro388Asp389Lys390Pro391Leu392Ser393Asn394

Sequence conservation (by blast)

[Site 2] LQELLSTHLL480-SPWGAEVKVE

Leu480 Ser

P10 P9 P8 P7 P6 P5 P4 P3 P2 P1
Leu471Gln472Glu473Leu474Leu475Ser476Thr477His478Leu479Leu480
P1' P2' P3' P4' P5' P6' P7' P8' P9' P10'
Ser481Pro482Trp483Gly484Ala485Glu486Val487Lys488Val489Glu490

Sequence conservation (by blast)

[Site 3] EAVGPKGKSG502-AAPSKKSKGP

Gly502 Ala

P10 P9 P8 P7 P6 P5 P4 P3 P2 P1
Glu493Ala494Val495Gly496Pro497Lys498Gly499Lys500Ser501Gly502
P1' P2' P3' P4' P5' P6' P7' P8' P9' P10'
Ala503Ala504Pro505Ser506Lys507Lys508Ser509Lys510Gly511Pro512

Sequence conservation (by blast)

[Site 4] QDEEAVKKLT658-VNPGTKSKLP

Thr658 Val

iTraq-117 Signal 1517.9 () for KKLTVNPGTK

P10 P9 P8 P7 P6 P5 P4 P3 P2 P1
Gln649Asp650Glu651Glu652Ala653Val654Lys655Lys656Leu657Thr658
P1' P2' P3' P4' P5' P6' P7' P8' P9' P10'
Val659Asn660Pro661Gly662Thr663Lys664Ser665Lys666Leu667Pro668

Sequence conservation (by blast)

* References

[PubMed ID: 23272074] Wu B, Liu HL, Zhang S, Dong XR, Wu G, Lack of an association between two BER gene polymorphisms and breast cancer risk: a meta-analysis. PLoS One. 2012;7(12):e50857. doi: 10.1371/journal.pone.0050857. Epub 2012 Dec 14.

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