SB0145 : Troponin T3, fast skeletal muscle, TnTf
[ CaMP Format ]
* Basic Information
| Organism | Sus scrofa (pig) |
| Protein Names | troponin T fast skeletal muscle type [Sus scrofa]; troponin T fast skeletal muscle type |
| Gene Names | tnnt3 |
| Gene Locus | Not available |
| GO Function | Not available |
| Entrez Protein | Entrez Nucleotide | Entrez Gene | UniProt | OMIM | HGNC | HPRD | KEGG |
|---|---|---|---|---|---|---|---|
| BAD15378 | N/A | N/A | N/A | N/A | N/A | N/A | N/A |
* Information From OMIM
Not Available.
* Structure Information
1. Primary Information
Length: 266 aa
Average Mass: 31.547 kDa
Monoisotopic Mass: 31.528 kDa
2. Domain Information
Annotated Domains: Not Available.
Computationally Assigned Domains (Pfam+HMMER):
| domain name | begin | end | score | e-value |
|---|---|---|---|---|
| Troponin 1. | 7 | 27 | 19.0 | 2.7 |
| --- cleavage 22 (inside Troponin 7..27) --- | ||||
| --- cleavage 38 --- | ||||
| --- cleavage 52 --- | ||||
| Tetratricopeptide repeat 1. | 99 | 114 | 11.0 | 0.8 |
| Tetratricopeptide repeat 2. | 133 | 141 | 20.0 | 1.4 |
| Tetratricopeptide repeat 3. | 164 | 198 | 6.0 | 0.0 |
| Troponin 2. | 200 | 251 | 45.0 | 1.8 |
3. Sequence Information
Fasta Sequence: SB0145.fasta
Amino Acid Sequence and Secondary Structures (PsiPred):
4. 3D Information
Not Available.
* Cleavage Information
3 [sites] cleaved by Calpain 2
Source Reference: [PubMed ID: 15884856] Kitamura S, Muroya S, Tanabe S, Okumura T, Chikuni K, Nishimura T, Mechanism of production of troponin T fragments during postmortem aging of porcine muscle. J Agric Food Chem. 2005 May 18;53(10):4178-81.
Cleavage sites (±10aa)
[Site 1] YEEEEEAQEE22-APPPPAEVHE
Glu22 
Ala
 |
|||||||||
| P10 | P9 | P8 | P7 | P6 | P5 | P4 | P3 | P2 | P1 |
|---|---|---|---|---|---|---|---|---|---|
| Tyr13 | Glu14 | Glu15 | Glu16 | Glu17 | Glu18 | Ala19 | Gln20 | Glu21 | Glu22 |
 |
|||||||||
| P1' | P2' | P3' | P4' | P5' | P6' | P7' | P8' | P9' | P10' |
| Ala23 | Pro24 | Pro25 | Pro26 | Pro27 | Ala28 | Glu29 | Val30 | His31 | Glu32 |
Sequence conservation (by blast)
Sequence conservation (by blast)
| Reference peptide (cleaved bond±30 residues) |
|---|
| MSDEEVEHVEEEYEEEEEAQEEAPPPPAEVHEVHEEVHEVHEPEEKPRPKLT |
Summary
| # | organism | max score | hits | top seq |
|---|---|---|---|---|
| 1 | Sus scrofa | 97.10 | 3 | troponin T fast skeletal muscle type |
| 2 | Bos taurus | 91.30 | 3 | troponin T fast skeletal muscle type |
| 3 | Sus scrofa | 90.90 | 1 | troponin T3, skeletal, fast |
Top-ranked sequences
| organism | matching |
|---|---|
| Sus scrofa | Query 1 MSDEEVEHVEEEYEEEEEAQEE#APPPPAEVHEVHEEVHEVHEPEEKPRPKLT 52 ||||||||||||||||||||||#|||||||||||||||||||||||||||||| Query 1 MSDEEVEHVEEEYEEEEEAQEE#APPPPAEVHEVHEEVHEVHEPEEKPRPKLT 52 |
| Bos taurus | Query 1 MSDEEVEHVEEEYEEEEEAQEE#APPPPAEVHEVHEEVHEVHEPEEKPRPKLT 52 ||||||||||||||||||||||#|||||||| ||||||||||||||||||+|| Sbjct 1 MSDEEVEHVEEEYEEEEEAQEE#APPPPAEVPEVHEEVHEVHEPEEKPRPRLT 52 |
| Sus scrofa | Query 1 MSDEEVEHVEEEYEEEEEAQEE#APPPPAEVHEVHEEVHEVHEP-----EEKPRPKLT 52 ||||||||||||||||||||||#||||||||||||||||||||| ||||||||| Sbjct 1 MSDEEVEHVEEEYEEEEEAQEE#APPPPAEVHEVHEEVHEVHEPEEVQEEEKPRPKLT 57 |
[Site 2] EVHEVHEEVH38-EVHEPEEKPR
His38 Glu
|
|||||||||
| P10 | P9 | P8 | P7 | P6 | P5 | P4 | P3 | P2 | P1 |
|---|---|---|---|---|---|---|---|---|---|
| Glu29 | Val30 | His31 | Glu32 | Val33 | His34 | Glu35 | Glu36 | Val37 | His38 |
|
|||||||||
| P1' | P2' | P3' | P4' | P5' | P6' | P7' | P8' | P9' | P10' |
| Glu39 | Val40 | His41 | Glu42 | Pro43 | Glu44 | Glu45 | Lys46 | Pro47 | Arg48 |
Sequence conservation (by blast) Sequence conservation (by blast)
| Reference peptide (cleaved bond±30 residues) |
|---|
| VEEEYEEEEEAQEEAPPPPAEVHEVHEEVHEVHEPEEKPRPKLTAPKIPEGEKVDFDDIQ |
Summary
| # | organism | max score | hits | top seq |
|---|---|---|---|---|
| 1 | Sus scrofa | 115.00 | 7 | troponin T fast skeletal muscle type |
| 2 | Bos taurus | 110.00 | 7 | troponin T fast skeletal muscle type |
| 3 | Sus scrofa | 109.00 | 1 | troponin T3, skeletal, fast |
| 4 | Meleagris gallopavo | 60.10 | 2 | fast skeletal muscle troponin T isoform 1e17 |
| 5 | Mitu tomentosa | 60.10 | 2 | AF220158_1 fast skeletal muscle troponin T |
| 6 | N/A | 59.70 | 17 | TNNT3_RABIT Troponin T, fast skeletal muscle (TnT |
| 7 | Rattus norvegicus | 58.50 | 32 | troponin T class IVd beta-4 |
| 8 | Meleagris gallopavo | 54.70 | 2 | fast skeletal muscle troponin T |
| 9 | rabbits, skeletal muscle, Peptide Partial, 234 aa | 54.70 | 1 | troponin T alpha isoform, TnT alpha isoform, TnT- |
| 10 | Mus musculus | 52.80 | 16 | Tnnt3 protein |
| 11 | Coturnix japonica | 52.80 | 13 | fast troponin T isoform |
| 12 | Rattus norvegicus | 52.80 | 8 | troponin T class IVb alpha |
| 13 | rabbits, skeletal muscle, Peptide, 249 aa | 52.80 | 1 | troponin T beta isoform, TnT beta isoform, TnT-5 |
| 14 | Mus musculus | 52.80 | 1 | troponin T3, skeletal, fast |
| 15 | Homo sapiens | 52.40 | 13 | troponin T3, skeletal, fast isoform 2 |
| 16 | synthetic construct | 52.00 | 1 | troponin T3, skeletal, fast |
| 17 | Canis familiaris | 51.60 | 7 | PREDICTED: similar to Troponin T, fast skeletal m |
| 18 | Bos taurus | 51.60 | 2 | troponin T3, skeletal, fast |
| 19 | Xenopus tropicalis | 51.20 | 1 | troponin T type 3 (skeletal, fast) |
| 20 | Xenopus tropicalis | 50.80 | 1 | troponin T3, skeletal, fast |
| 21 | Xenopus laevis | 49.70 | 4 | Tnnt3a protein |
| 22 | Hyla chrysoscelis | 48.50 | 1 | troponin T |
| 23 | Gallus gallus | 46.20 | 2 | troponin T3, skeletal, fast |
| 24 | Gallus gallus | 46.20 | 1 | fast skeletal muscle troponin T isoform |
| 25 | Danio rerio | 45.10 | 2 | troponin T3a, skeletal, fast |
| 26 | Tetraodon nigroviridis | 42.40 | 6 | unnamed protein product |
| 27 | Sparus aurata | 42.00 | 2 | slow troponin T 2 |
| 28 | Salmo salar | 42.00 | 1 | fast myotomal muscle troponin-T |
| 29 | Gadus morhua | 41.20 | 1 | AF500272_1 fast skeletal muscle troponin T |
| 30 | Xenopus laevis | 36.60 | 3 | AF467920_1 cardiac troponin T |
| 31 | Bufo marinus | 36.60 | 1 | low molecular weight slow troponin T |
| 32 | Danio rerio | 36.60 | 1 | PREDICTED: similar to slow troponin T 1 |
| 33 | Cavia porcellus | 36.20 | 6 | cardiac troponin 2, exclusion exon 6 #1 isoform |
| 34 | Oryctolagus cuniculus | 35.80 | 1 | troponin T cardiac isoform |
| 35 | Felis catus | 35.80 | 1 | troponin T type 2, cardiac |
| 36 | Canis lupus familiaris | 35.80 | 1 | troponin T type 2, cardiac |
| 37 | Canis familiaris | 35.80 | 1 | cardiac troponin T isoform 1 |
| 38 | Felis catus | 35.80 | 1 | cardiac troponin T |
| 39 | Homo sapiens | 35.40 | 1 | truncated cardiac troponin T |
| 40 | Pan troglodytes | 35.40 | 1 | PREDICTED: similar to troponin T type 2, cardiac |
Top-ranked sequences
| organism | matching |
|---|---|
| Sus scrofa | Query 9 VEEEYEEEEEAQEEAPPPPAEVHEVHEEVH#EVHEPEEKPRPKLTAPKIPEGEKVDFDDIQ 68 ||||||||||||||||||||||||||||||#|||||||||||||||||||||||||||||| Query 9 VEEEYEEEEEAQEEAPPPPAEVHEVHEEVH#EVHEPEEKPRPKLTAPKIPEGEKVDFDDIQ 68 |
| Bos taurus | Query 9 VEEEYEEEEEAQEEAPPPPAEVHEVHEEVH#EVHEPEEKPRPKLTAPKIPEGEKVDFDDIQ 68 |||||||||||||||||||||| |||||||#|||||||||||+|||||||||||||||||| Sbjct 9 VEEEYEEEEEAQEEAPPPPAEVPEVHEEVH#EVHEPEEKPRPRLTAPKIPEGEKVDFDDIQ 68 |
| Sus scrofa | Query 9 VEEEYEEEEEAQEEAPPPPAEVHEVHEEVH#EVHEP-----EEKPRPKLTAPKIPEGEKVD 63 ||||||||||||||||||||||||||||||#||||| |||||||||||||||||||| Sbjct 9 VEEEYEEEEEAQEEAPPPPAEVHEVHEEVH#EVHEPEEVQEEEKPRPKLTAPKIPEGEKVD 68 Query 64 FDDIQ 68 ||||| Query 64 FDDIQ 68 |
| Meleagris gallopavo | Query 23 APPPPAEVHEVHEEVH#EVHEPEEKPRPKLTAPKIPEGEKVDFDDIQ 68 | ||| # ||||||||| ||||||||||||||||||| Sbjct 72 AAPPP-----------#-VHEPEEKPRIKLTAPKIPEGEKVDFDDIQ 105 |
| Mitu tomentosa | Query 40 VHEPEEKPRPKLTAPKIPEGEKVDFDDIQ 68 ||||||||| ||||||||||||||||||| Sbjct 55 VHEPEEKPRIKLTAPKIPEGEKVDFDDIQ 83 |
| N/A | Query 25 PPPAEVHEVHEEVH---#EVHE-----------PEEKPRPKLTAPKIPEGEKVDFDDIQ 68 | |||||| ||| #|||| ||||||||||||||||||||||||| Sbjct 24 PSPAEVHEPAPEVHVPE#EVHEDALEDMREEEEEEEKPRPKLTAPKIPEGEKVDFDDIQ 81 |
| Rattus norvegicus | Query 42 EPEEKPRPKLTAPKIPEGEKVDFDDIQ 68 ||||||||||||||||||||||||||| Query 42 EPEEKPRPKLTAPKIPEGEKVDFDDIQ 68 |
| Meleagris gallopavo | Query 37 VH#EVHE----PEEKPRPKLTAPKIPEGEKVDFDDIQ 68 | #||| |||||| ||||||||||||||||||| Sbjct 66 VE#EVHHAAPPPEEKPRIKLTAPKIPEGEKVDFDDIQ 101 |
| rabbits, skeletal muscle, Peptide Partial, 234 aa | Query 35 EEVH#EVHEPEEKPRPKLTAPKIPEGEKVDFDDIQ 68 |+| #| | ||||||||||||||||||||||||| Sbjct 3 EDVR#EEEEEEEKPRPKLTAPKIPEGEKVDFDDIQ 36 |
| Mus musculus | Query 46 KPRPKLTAPKIPEGEKVDFDDIQ 68 ||||||||||||||||||||||| Query 46 KPRPKLTAPKIPEGEKVDFDDIQ 68 |
| Coturnix japonica | Query 43 PEEKPRPKLTAPKIPEGEKVDFDDIQ 68 |||||| ||||||||||||||||||| Sbjct 55 PEEKPRIKLTAPKIPEGEKVDFDDIQ 80 |
| Rattus norvegicus | Query 46 KPRPKLTAPKIPEGEKVDFDDIQ 68 ||||||||||||||||||||||| Query 46 KPRPKLTAPKIPEGEKVDFDDIQ 68 |
| rabbits, skeletal muscle, Peptide, 249 aa | Query 46 KPRPKLTAPKIPEGEKVDFDDIQ 68 ||||||||||||||||||||||| Query 46 KPRPKLTAPKIPEGEKVDFDDIQ 68 |
| Mus musculus | Query 46 KPRPKLTAPKIPEGEKVDFDDIQ 68 ||||||||||||||||||||||| Query 46 KPRPKLTAPKIPEGEKVDFDDIQ 68 |
| Homo sapiens | Query 46 KPRPKLTAPKIPEGEKVDFDDIQ 68 ||||||||||||||||||||||| Query 46 KPRPKLTAPKIPEGEKVDFDDIQ 68 |
| synthetic construct | Query 45 EKPRPKLTAPKIPEGEKVDFDDIQ 68 |||||||||||||||||||||||| Query 45 EKPRPKLTAPKIPEGEKVDFDDIQ 68 |
| Canis familiaris | Query 46 KPRPKLTAPKIPEGEKVDFDDIQ 68 ||||+|||||||||||||||||| Sbjct 41 KPRPRLTAPKIPEGEKVDFDDIQ 63 |
| Bos taurus | Query 46 KPRPKLTAPKIPEGEKVDFDDIQ 68 ||||+|||||||||||||||||| Sbjct 30 KPRPRLTAPKIPEGEKVDFDDIQ 52 |
| Xenopus tropicalis | Query 46 KPRPKLTAPKIPEGEKVDFDDIQ 68 ||+|||||||||||||||||||| Sbjct 25 KPKPKLTAPKIPEGEKVDFDDIQ 47 |
| Xenopus tropicalis | Query 46 KPRPKLTAPKIPEGEKVDFDDIQ 68 ||+|||||||||||||||||||| Sbjct 51 KPKPKLTAPKIPEGEKVDFDDIQ 73 |
| Xenopus laevis | Query 46 KPRPKLTAPKIPEGEKVDFDDIQ 68 ||+|||||||||+|||||||||| Sbjct 54 KPKPKLTAPKIPDGEKVDFDDIQ 76 |
| Hyla chrysoscelis | Query 46 KPRPKLTAPKIPEGEKVDFDDIQ 68 ||+||+||||||+|||||||||| Sbjct 31 KPKPKITAPKIPDGEKVDFDDIQ 53 |
| Gallus gallus | Query 48 RPKLTAPKIPEGEKVDFDDIQ 68 | ||||||||||||||||||| Sbjct 71 RIKLTAPKIPEGEKVDFDDIQ 91 |
| Gallus gallus | Query 48 RPKLTAPKIPEGEKVDFDDIQ 68 | ||||||||||||||||||| Sbjct 35 RIKLTAPKIPEGEKVDFDDIQ 55 |
| Danio rerio | Query 39 EVHEPEEKPRPKLTAPKIPEGEKVDFDDIQ 68 | | ||||+ | ||||||+|||||||||| Sbjct 8 EQHFEEEKPKFKPTAPKIPDGEKVDFDDIQ 37 |
| Tetraodon nigroviridis | Query 46 KPRPKLTAPKIPEGEKVDFDDIQ 68 ||+ | ||||||||||||||||| Sbjct 116 KPKFKPTAPKIPEGEKVDFDDIQ 138 |
| Sparus aurata | Query 28 AEVHEVHEEVH#EVHEPEEKPRPK----LTAPKIPEGEKVDFDDI 67 ++ || || #+ | | ||+|| ++|||||+||||||||| Sbjct 2 SDTEEVLEEEV#QDGEDESKPKPKFMTNISAPKIPDGEKVDFDDI 45 |
| Salmo salar | Query 48 RPKLTAPKIPEGEKVDFDDIQ 68 ||+ |||||+|||||||||| Sbjct 11 RPQFKAPKIPDGEKVDFDDIQ 31 |
| Gadus morhua | Query 44 EEKPRPKLTAPKIPEGEKVDFDDIQ 68 +|||+ | +|||||+|||||||||| Sbjct 12 DEKPKFKPSAPKIPDGEKVDFDDIQ 36 |
| Xenopus laevis | Query 46 KPRPKLTAP-----KIPEGEKVDFDDI 67 ||+||| | |||+||||||||| Sbjct 34 KPKPKLFMPNLMPLKIPDGEKVDFDDI 60 |
| Bufo marinus | Query 49 PKLTAPKIPEGEKVDFDDI 67 |+| |||||||+|||||| Sbjct 33 PRLAPPKIPEGERVDFDDI 51 |
| Danio rerio | Query 46 KPRPK-----LTAPKIPEGEKVDFDDI 67 +|||| | |||||||+|||||| Sbjct 46 RPRPKPMVPQLAPPKIPEGERVDFDDI 72 |
| Cavia porcellus | Query 44 EEKPRPKLTAP-----KIPEGEKVDFDDI 67 | ||+|+| | |||+||+|||||| Sbjct 38 ESKPKPRLFMPNLVPPKIPDGERVDFDDI 66 |
| Oryctolagus cuniculus | Query 40 VHEPEEKPRP---KLTAPKIPEGEKVDFDDI 67 | | + |||| | ||||+||+|||||| Sbjct 80 VEESKPKPRPFMPNLVPPKIPDGERVDFDDI 110 |
| Felis catus | Query 40 VHEPEEKPRP---KLTAPKIPEGEKVDFDDI 67 | | + |||| | ||||+||+|||||| Sbjct 59 VEESKPKPRPFMPNLVPPKIPDGERVDFDDI 89 |
| Canis lupus familiaris | Query 40 VHEPEEKPRP---KLTAPKIPEGEKVDFDDI 67 | | + |||| | ||||+||+|||||| Sbjct 55 VEESKPKPRPFMPNLVPPKIPDGERVDFDDI 85 |
| Canis familiaris | Query 40 VHEPEEKPRP---KLTAPKIPEGEKVDFDDI 67 | | + |||| | ||||+||+|||||| Sbjct 60 VEESKPKPRPFMPNLVPPKIPDGERVDFDDI 90 |
| Felis catus | Query 40 VHEPEEKPRP---KLTAPKIPEGEKVDFDDI 67 | | + |||| | ||||+||+|||||| Sbjct 69 VEESKPKPRPFMPNLVPPKIPDGERVDFDDI 99 |
| Homo sapiens | Query 46 KPR---PKLTAPKIPEGEKVDFDDI 67 ||| | | ||||+||+|||||| Sbjct 66 KPRSFMPNLVPPKIPDGERVDFDDI 90 |
| Pan troglodytes | Query 46 KPR---PKLTAPKIPEGEKVDFDDI 67 ||| | | ||||+||+|||||| Sbjct 7 KPRSFMPNLVPPKIPDGERVDFDDI 31 |
[Site 3] PEEKPRPKLT52-APKIPEGEKV
Thr52 Ala
|
|||||||||
| P10 | P9 | P8 | P7 | P6 | P5 | P4 | P3 | P2 | P1 |
|---|---|---|---|---|---|---|---|---|---|
| Pro43 | Glu44 | Glu45 | Lys46 | Pro47 | Arg48 | Pro49 | Lys50 | Leu51 | Thr52 |
|
|||||||||
| P1' | P2' | P3' | P4' | P5' | P6' | P7' | P8' | P9' | P10' |
| Ala53 | Pro54 | Lys55 | Ile56 | Pro57 | Glu58 | Gly59 | Glu60 | Lys61 | Val62 |
Sequence conservation (by blast) Sequence conservation (by blast)
| Reference peptide (cleaved bond±30 residues) |
|---|
| APPPPAEVHEVHEEVHEVHEPEEKPRPKLTAPKIPEGEKVDFDDIQKKRQNKDLMELQAL |
Summary
| # | organism | max score | hits | top seq |
|---|---|---|---|---|
| 1 | Sus scrofa | 123.00 | 7 | troponin T fast skeletal muscle type |
| 2 | Bos taurus | 117.00 | 8 | troponin T fast skeletal muscle type |
| 3 | Sus scrofa | 117.00 | 1 | troponin T3, skeletal, fast |
| 4 | Homo sapiens | 95.90 | 16 | hypothetical protein |
| 5 | synthetic construct | 95.50 | 1 | troponin T3, skeletal, fast |
| 6 | N/A | 86.70 | 12 | TNNT3_RABIT Troponin T, fast skeletal muscle (TnT |
| 7 | Rattus norvegicus | 85.90 | 37 | troponin T class IVd beta-4 |
| 8 | Meleagris gallopavo | 85.50 | 2 | fast skeletal muscle troponin T isoform 1e17 |
| 9 | Mitu tomentosa | 84.70 | 2 | AF220158_1 fast skeletal muscle troponin T |
| 10 | rabbits, skeletal muscle, Peptide Partial, 234 aa | 80.50 | 1 | troponin T alpha isoform, TnT alpha isoform, TnT- |
| 11 | Meleagris gallopavo | 80.10 | 2 | fast skeletal muscle troponin T |
| 12 | rabbits, skeletal muscle, Peptide, 249 aa | 79.00 | 1 | troponin T beta isoform, TnT beta isoform, TnT-5 |
| 13 | Mus musculus | 78.60 | 15 | troponin T fast skeletal muscle isoform |
| 14 | Rattus norvegicus | 78.60 | 8 | troponin T class IVb alpha |
| 15 | Mus musculus | 78.60 | 1 | troponin T3, skeletal, fast |
| 16 | Canis familiaris | 77.80 | 5 | PREDICTED: similar to Troponin T, fast skeletal m |
| 17 | Bos taurus | 77.80 | 1 | troponin T3, skeletal, fast |
| 18 | Coturnix japonica | 77.00 | 13 | fast troponin T isoform |
| 19 | Xenopus tropicalis | 73.90 | 1 | troponin T type 3 (skeletal, fast) |
| 20 | Xenopus tropicalis | 73.90 | 1 | troponin T3, skeletal, fast |
| 21 | Xenopus laevis | 72.80 | 4 | Tnnt3a protein |
| 22 | Hyla chrysoscelis | 71.60 | 1 | troponin T |
| 23 | Gallus gallus | 70.50 | 2 | troponin T3, skeletal, fast |
| 24 | Gallus gallus | 70.50 | 1 | fast skeletal muscle troponin T isoform |
| 25 | Danio rerio | 67.40 | 2 | troponin T3b, skeletal, fast |
| 26 | Tetraodon nigroviridis | 65.90 | 5 | unnamed protein product |
| 27 | Salmo salar | 64.70 | 1 | fast myotomal muscle troponin-T |
| 28 | Gadus morhua | 63.90 | 1 | AF500272_1 fast skeletal muscle troponin T |
| 29 | Sparus aurata | 61.20 | 2 | slow troponin T 2 |
| 30 | Oryctolagus cuniculus | 59.70 | 1 | unnamed protein product |
| 31 | Danio rerio | 52.80 | 1 | PREDICTED: similar to slow troponin T 1 |
| 32 | Bufo marinus | 52.80 | 1 | low molecular weight slow troponin T |
| 33 | Xenopus laevis | 50.80 | 3 | AF467920_1 cardiac troponin T |
| 34 | Homo sapiens | 50.80 | 3 | truncated cardiac troponin T |
| 35 | Pan troglodytes | 50.80 | 1 | PREDICTED: similar to troponin T type 2, cardiac |
| 36 | Cavia porcellus | 50.10 | 1 | cardiac troponin 2, exclusion exon 6 #2 isoform |
Top-ranked sequences
| organism | matching |
|---|---|
| Sus scrofa | Query 23 APPPPAEVHEVHEEVHEVHEPEEKPRPKLT#APKIPEGEKVDFDDIQKKRQNKDLMELQAL 82 ||||||||||||||||||||||||||||||#|||||||||||||||||||||||||||||| Query 23 APPPPAEVHEVHEEVHEVHEPEEKPRPKLT#APKIPEGEKVDFDDIQKKRQNKDLMELQAL 82 |
| Bos taurus | Query 23 APPPPAEVHEVHEEVHEVHEPEEKPRPKLT#APKIPEGEKVDFDDIQKKRQNKDLMELQAL 82 |||||||| ||||||||||||||||||+||#|||||||||||||||||||||||||||||| Sbjct 23 APPPPAEVPEVHEEVHEVHEPEEKPRPRLT#APKIPEGEKVDFDDIQKKRQNKDLMELQAL 82 |
| Sus scrofa | Query 23 APPPPAEVHEVHEEVHEVHEPEE-----KPRPKLT#APKIPEGEKVDFDDIQKKRQNKDLM 77 ||||||||||||||||||||||| |||||||#||||||||||||||||||||||||| Sbjct 23 APPPPAEVHEVHEEVHEVHEPEEVQEEEKPRPKLT#APKIPEGEKVDFDDIQKKRQNKDLM 82 Query 78 ELQAL 82 ||||| Query 78 ELQAL 82 |
| Homo sapiens | Query 23 APPPPAEVHEVHEEVHEVHEPEEKPRPKLT#APKIPEGEKVDFDDIQKKRQNKDLMELQAL 82 | ||||| ||||||||||||||#|||||||||||||||||||||||||||||| Sbjct 19 AQEEAAEVHE------EVHEPEEKPRPKLT#APKIPEGEKVDFDDIQKKRQNKDLMELQAL 72 |
| synthetic construct | Query 23 APPPPAEVHEVHEEVHEVHEPEEKPRPKLT#APKIPEGEKVDFDDIQKKRQNKDLMELQAL 82 | ||||| ||||||||||||||#|||||||||||||||||||||||||||||| Sbjct 19 AQEEAAEVHE------EVHEPEEKPRPKLT#APKIPEGEKVDFDDIQKKRQNKDLMELQAL 72 |
| N/A | Query 25 PPPAEVHEVHEEVH---EVHE-----------PEEKPRPKLT#APKIPEGEKVDFDDIQKK 70 | |||||| ||| |||| |||||||||#|||||||||||||||||| Sbjct 24 PSPAEVHEPAPEVHVPEEVHEDALEDMREEEEEEEKPRPKLT#APKIPEGEKVDFDDIQKK 83 Query 71 RQNKDLMELQAL 82 |||||||||||| Query 71 RQNKDLMELQAL 82 |
| Rattus norvegicus | Query 35 EEVHEVH--EPEEKPRPKLT#APKIPEGEKVDFDDIQKKRQNKDLMELQAL 82 || +| |||||||||||#|||||||||||||||||||||||||||||| Sbjct 4 EETEQVEAPEPEEKPRPKLT#APKIPEGEKVDFDDIQKKRQNKDLMELQAL 53 |
| Meleagris gallopavo | Query 35 EEVHE-----VHEPEEKPRPKLT#APKIPEGEKVDFDDIQKKRQNKDLMELQAL 82 |||| ||||||||| |||#||||||||||||||||||||||||+||||| Sbjct 67 EEVHHAAPPPVHEPEEKPRIKLT#APKIPEGEKVDFDDIQKKRQNKDLIELQAL 119 |
| Mitu tomentosa | Query 40 VHEPEEKPRPKLT#APKIPEGEKVDFDDIQKKRQNKDLMELQAL 82 ||||||||| |||#||||||||||||||||||||||||+||||| Sbjct 55 VHEPEEKPRIKLT#APKIPEGEKVDFDDIQKKRQNKDLIELQAL 97 |
| rabbits, skeletal muscle, Peptide Partial, 234 aa | Query 35 EEVHEVHEPEEKPRPKLT#APKIPEGEKVDFDDIQKKRQNKDLMELQAL 82 |+| | | |||||||||#|||||||||||||||||||||||||||||| Sbjct 3 EDVREEEEEEEKPRPKLT#APKIPEGEKVDFDDIQKKRQNKDLMELQAL 50 |
| Meleagris gallopavo | Query 37 VHEVHE----PEEKPRPKLT#APKIPEGEKVDFDDIQKKRQNKDLMELQAL 82 | ||| |||||| |||#||||||||||||||||||||||||+||||| Sbjct 66 VEEVHHAAPPPEEKPRIKLT#APKIPEGEKVDFDDIQKKRQNKDLIELQAL 115 |
| rabbits, skeletal muscle, Peptide, 249 aa | Query 46 KPRPKLT#APKIPEGEKVDFDDIQKKRQNKDLMELQAL 82 |||||||#|||||||||||||||||||||||||||||| Query 46 KPRPKLT#APKIPEGEKVDFDDIQKKRQNKDLMELQAL 82 |
| Mus musculus | Query 46 KPRPKLT#APKIPEGEKVDFDDIQKKRQNKDLMELQAL 82 |||||||#|||||||||||||||||||||||||||||| Query 46 KPRPKLT#APKIPEGEKVDFDDIQKKRQNKDLMELQAL 82 |
| Rattus norvegicus | Query 46 KPRPKLT#APKIPEGEKVDFDDIQKKRQNKDLMELQAL 82 |||||||#|||||||||||||||||||||||||||||| Query 46 KPRPKLT#APKIPEGEKVDFDDIQKKRQNKDLMELQAL 82 |
| Mus musculus | Query 46 KPRPKLT#APKIPEGEKVDFDDIQKKRQNKDLMELQAL 82 |||||||#|||||||||||||||||||||||||||||| Query 46 KPRPKLT#APKIPEGEKVDFDDIQKKRQNKDLMELQAL 82 |
| Canis familiaris | Query 46 KPRPKLT#APKIPEGEKVDFDDIQKKRQNKDLMELQAL 82 ||||+||#|||||||||||||||||||||||||||||| Sbjct 41 KPRPRLT#APKIPEGEKVDFDDIQKKRQNKDLMELQAL 77 |
| Bos taurus | Query 46 KPRPKLT#APKIPEGEKVDFDDIQKKRQNKDLMELQAL 82 ||||+||#|||||||||||||||||||||||||||||| Sbjct 30 KPRPRLT#APKIPEGEKVDFDDIQKKRQNKDLMELQAL 66 |
| Coturnix japonica | Query 43 PEEKPRPKLT#APKIPEGEKVDFDDIQKKRQNKDLMELQAL 82 |||||| |||#||||||||||||||||||||||||+||||| Sbjct 55 PEEKPRIKLT#APKIPEGEKVDFDDIQKKRQNKDLIELQAL 94 |
| Xenopus tropicalis | Query 46 KPRPKLT#APKIPEGEKVDFDDIQKKRQNKDLMELQAL 82 ||+||||#||||||||||||||||||||||||+|||+| Sbjct 25 KPKPKLT#APKIPEGEKVDFDDIQKKRQNKDLIELQSL 61 |
| Xenopus tropicalis | Query 46 KPRPKLT#APKIPEGEKVDFDDIQKKRQNKDLMELQAL 82 ||+||||#||||||||||||||||||||||||+|||+| Sbjct 51 KPKPKLT#APKIPEGEKVDFDDIQKKRQNKDLIELQSL 87 |
| Xenopus laevis | Query 46 KPRPKLT#APKIPEGEKVDFDDIQKKRQNKDLMELQAL 82 ||+||||#|||||+||||||||||||||||||+|||+| Sbjct 54 KPKPKLT#APKIPDGEKVDFDDIQKKRQNKDLIELQSL 90 |
| Hyla chrysoscelis | Query 46 KPRPKLT#APKIPEGEKVDFDDIQKKRQNKDLMELQAL 82 ||+||+|#|||||+||||||||||||||||||+|||+| Sbjct 31 KPKPKIT#APKIPDGEKVDFDDIQKKRQNKDLIELQSL 67 |
| Gallus gallus | Query 48 RPKLT#APKIPEGEKVDFDDIQKKRQNKDLMELQAL 82 | |||#||||||||||||||||||||||||+||||| Sbjct 71 RIKLT#APKIPEGEKVDFDDIQKKRQNKDLIELQAL 105 |
| Gallus gallus | Query 48 RPKLT#APKIPEGEKVDFDDIQKKRQNKDLMELQAL 82 | |||#||||||||||||||||||||||||+||||| Sbjct 35 RIKLT#APKIPEGEKVDFDDIQKKRQNKDLIELQAL 69 |
| Danio rerio | Query 39 EVHEPEEKPRPKLT#APKIPEGEKVDFDDIQKKRQNKDLMELQAL 82 | ++ ||||+ | +#|||||+|+||||||||||||||||+||||| Sbjct 10 EEYDEEEKPKFKPS#APKIPDGDKVDFDDIQKKRQNKDLVELQAL 53 |
| Tetraodon nigroviridis | Query 46 KPRPKLT#APKIPEGEKVDFDDIQKKRQNKDLMELQAL 82 ||+ | |#||||||||||||||||||||||||+|||+| Sbjct 116 KPKFKPT#APKIPEGEKVDFDDIQKKRQNKDLIELQSL 152 |
| Salmo salar | Query 48 RPKLT#APKIPEGEKVDFDDIQKKRQNKDLMELQAL 82 ||+ #|||||+||||||||||||||||||+||| | Sbjct 11 RPQFK#APKIPDGEKVDFDDIQKKRQNKDLVELQGL 45 |
| Gadus morhua | Query 35 EEVHEVHEPEEKPRPKLT#APKIPEGEKVDFDDIQKKRQNKDLMELQAL 82 |+| +| +|||+ | +#|||||+|||||||||||||||||| ||| | Sbjct 5 EDVDQV--EDEKPKFKPS#APKIPDGEKVDFDDIQKKRQNKDLSELQGL 50 |
| Sparus aurata | Query 28 AEVHEVHEEVHEVHEPEEKPRPK----LT#APKIPEGEKVDFDDIQKKRQNKDLMELQAL 82 ++ || || + | | ||+|| ++#|||||+||||||||| +||| ||| |||+| Sbjct 2 SDTEEVLEEEVQDGEDESKPKPKFMTNIS#APKIPDGEKVDFDDIHRKRQEKDLSELQSL 60 |
| Oryctolagus cuniculus | Query 56 IPEGEKVDFDDIQKKRQNKDLMELQAL 82 ||||||||||||||||||||||||||| Query 56 IPEGEKVDFDDIQKKRQNKDLMELQAL 82 |
| Danio rerio | Query 46 KPRPK-----LT#APKIPEGEKVDFDDIQKKRQNKDLMELQAL 82 +|||| | # |||||||+|||||| +|| |||+||| | Sbjct 46 RPRPKPMVPQLA#PPKIPEGERVDFDDIHRKRMEKDLLELQTL 87 |
| Bufo marinus | Query 49 PKLT#APKIPEGEKVDFDDIQKKRQNKDLMELQAL 82 |+| # |||||||+|||||| +|| |||+||| | Sbjct 33 PRLA#PPKIPEGERVDFDDIHRKRMEKDLLELQTL 66 |
| Xenopus laevis | Query 46 KPRPKLT#AP-----KIPEGEKVDFDDIQKKRQNKDLMELQAL 82 ||+||| # | |||+||||||||| +|| ||| ||| | Sbjct 34 KPKPKLF#MPNLMPLKIPDGEKVDFDDIHRKRMEKDLTELQTL 75 |
| Homo sapiens | Query 46 KPR---PKLT#APKIPEGEKVDFDDIQKKRQNKDLMELQAL 82 ||| | | # ||||+||+|||||| +|| ||| ||||| Sbjct 66 KPRSFMPNLV#PPKIPDGERVDFDDIHRKRMEKDLNELQAL 105 |
| Pan troglodytes | Query 46 KPR---PKLT#APKIPEGEKVDFDDIQKKRQNKDLMELQAL 82 ||| | | # ||||+||+|||||| +|| ||| ||||| Sbjct 7 KPRSFMPNLV#PPKIPDGERVDFDDIHRKRMEKDLNELQAL 46 |
| Cavia porcellus | Query 40 VHEPEEKPR---PKLT#APKIPEGEKVDFDDIQKKRQNKDLMELQAL 82 | | + ||| | | # ||||+||+|||||| +|| ||| ||| | Sbjct 32 VEESKPKPRLFMPNLV#PPKIPDGERVDFDDIHRKRMEKDLNELQTL 77 |
* References
[PubMed ID: 16556993] Kitamura S, Muroya S, Nakajima I, Chikuni K, Nishimura T, Amino acid sequences of porcine fast and slow troponin T isoforms. Biosci Biotechnol Biochem. 2006 Mar;70(3):726-8.