XSB0043 : PREDICTED: dystrophin, partial [Macaca mulatta]
[ CaMP Format ]
This entry is computationally expanded from SB0073
* Basic Information
| Organism | Macaca mulatta (rhesus monkey) |
| Protein Names | dystrophin |
| Gene Names | DMD; Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 7 ESTs, 15 Proteins |
| Gene Locus | Not available |
| GO Function | Not available |
* Information From OMIM
Not Available.
* Structure Information
1. Primary Information
Length: 2514 aa
Average Mass: 292.267 kDa
Monoisotopic Mass: 292.085 kDa
2. Domain Information
Annotated Domains: Not Available.
Computationally Assigned Domains (Pfam+HMMER):
| domain name | begin | end | score | e-value |
| Spectrin 1. | 41 | 149 | 78.9 | 1.8e-20 |
| Spectrin 2. | 150 | 258 | 67.2 | 6e-17 |
| KxDL 1. | 270 | 349 | -25.2 | 4 |
| Spectrin 3. | 421 | 529 | 9.4 | 0.0055 |
| Spectrin 4. | 532 | 636 | 37.1 | 7e-08 |
| Spectrin 5. | 645 | 747 | 12.2 | 0.0032 |
| Spectrin 6. | 750 | 856 | 84.8 | 3.2e-22 |
| Spectrin 7. | 859 | 965 | 58.9 | 1.9e-14 |
| Spectrin 8. | 968 | 1069 | 14.2 | 0.0022 |
| PSCyt1 1. | 1072 | 1111 | -15.8 | 8.8 |
| DUF1136 1. | 1115 | 1138 | -5.0 | 6.4 |
| Spectrin 9. | 1161 | 1270 | 0.4 | 0.031 |
| Spectrin 10. | 1273 | 1378 | 53.2 | 1e-12 |
| Spectrin 11. | 1381 | 1481 | 57.1 | 6.5e-14 |
| Involucrin 1. | 1551 | 1560 | 2.3 | 1.3e |
| Spectrin 12. | 1579 | 1681 | 47.1 | 6.8e-11 |
| --- cleavage 1694 --- |
| zf-C4_ClpX 1. | 1712 | 1737 | -12.8 | 8.6 |
| Spectrin 13. | 1806 | 1910 | 80.8 | 5e-21 |
| Spectrin 14. | 1913 | 2020 | 63.0 | 1.1e-15 |
| Involucrin 2. | 2032 | 2041 | 3.7 | 58 |
| Spectrin 15. | 2172 | 2279 | 19.0 | 0.00084 |
| Spectrin 16. | 2282 | 2388 | 27.1 | 7e-05 |
3. Sequence Information
Fasta Sequence: XSB0043.fasta
Amino Acid Sequence and Secondary Structures (PsiPred):
4. 3D Information
Not Available.
* Cleavage Information
1 [sites]
Cleavage sites (±10aa)
[Site 1] MVMTEDMPLE1694-ISYVPSTYLT
Glu1694 
Ile
 |
| P10 | P9 | P8 | P7 | P6 |
P5 | P4 | P3 | P2 | P1 |
| Met1685 | Val1686 | Met1687 | Thr1688 | Glu1689 | Asp1690 | Met1691 | Pro1692 | Leu1693 | Glu1694 |
 |
| P1' | P2' | P3' | P4' | P5' |
P6' | P7' | P8' | P9' | P10' |
| Ile1695 | Ser1696 | Tyr1697 | Val1698 | Pro1699 | Ser1700 | Thr1701 | Tyr1702 | Leu1703 | Thr1704 |
Sequence conservation (by blast)
Sequence conservation (by blast)
| Reference peptide (cleaved bond±30 residues) |
|---|
|
FAQFRRLNFAQIHTVREETMMVMTEDMPLEISYVPSTYLTEITHVSQALSEVEQLLNAPD
|
Summary
| # |
organism |
max score |
hits |
top seq |
| 1 |
Macaca mulatta |
120.00 |
1 |
PREDICTED: dystrophin, partial |
| 2 |
Homo sapiens |
118.00 |
15 |
dystrophin Dp260-1 isoform |
| 3 |
N/A |
118.00 |
2 |
D |
| 4 |
Bos taurus |
113.00 |
1 |
PREDICTED: similar to dystrophin Dp260-1 |
| 5 |
Canis lupus familiaris |
111.00 |
1 |
dystrophin |
| 6 |
Canis familiaris |
111.00 |
1 |
PREDICTED: hypothetical protein XP_850502 |
| 7 |
Sus scrofa |
111.00 |
1 |
dystrophin |
| 8 |
Rattus norvegicus |
106.00 |
1 |
PREDICTED: similar to dystrophin, muscular dystrop |
| 9 |
Mus musculus |
101.00 |
1 |
dystrophin, muscular dystrophy |
| 10 |
Monodelphis domestica |
87.80 |
1 |
PREDICTED: similar to T cell antigen receptor alph |
Top-ranked sequences
| organism | matching |
|---|
| Macaca mulatta |
Query 1665 FAQFRRLNFAQIHTVREETMMVMTEDMPLE#ISYVPSTYLTEITHVSQALSEVEQLLNAPD 1724
||||||||||||||||||||||||||||||#||||||||||||||||||||||||||||||
Query 1665 FAQFRRLNFAQIHTVREETMMVMTEDMPLE#ISYVPSTYLTEITHVSQALSEVEQLLNAPD 1724
|
| Homo sapiens |
Query 1665 FAQFRRLNFAQIHTVREETMMVMTEDMPLE#ISYVPSTYLTEITHVSQALSEVEQLLNAPD 1724
||||||||||||||||||||||||||||||#||||||||||||||||||| ||||||||||
Sbjct 622 FAQFRRLNFAQIHTVREETMMVMTEDMPLE#ISYVPSTYLTEITHVSQALLEVEQLLNAPD 681
|
| N/A |
Query 1665 FAQFRRLNFAQIHTVREETMMVMTEDMPLE#ISYVPSTYLTEITHVSQALSEVEQLLNAPD 1724
||||||||||||||||||||||||||||||#||||||||||||||||||| ||||||||||
Sbjct 1963 FAQFRRLNFAQIHTVREETMMVMTEDMPLE#ISYVPSTYLTEITHVSQALLEVEQLLNAPD 2022
|
| Bos taurus |
Query 1665 FAQFRRLNFAQIHTVREETMMVMTEDMPLE#ISYVPSTYLTEITHVSQALSEVEQLLNAPD 1724
||||||||||||||| ||++||||||||||#||||||||||||||| ||||||||||||||
Sbjct 622 FAQFRRLNFAQIHTVHEESVMVMTEDMPLE#ISYVPSTYLTEITHVLQALSEVEQLLNAPD 681
|
| Canis lupus familiaris |
Query 1665 FAQFRRLNFAQIHTVREETMMVMTEDMPLE#ISYVPSTYLTEITHVSQALSEVEQLLNAPD 1724
||||||||||||||| ||+++ ||||||||#|||||||||||||||||||||||+||||||
Sbjct 1965 FAQFRRLNFAQIHTVHEESVVAMTEDMPLE#ISYVPSTYLTEITHVSQALSEVEELLNAPD 2024
|
| Canis familiaris |
Query 1665 FAQFRRLNFAQIHTVREETMMVMTEDMPLE#ISYVPSTYLTEITHVSQALSEVEQLLNAPD 1724
||||||||||||||| ||+++ ||||||||#|||||||||||||||||||||||+||||||
Sbjct 1842 FAQFRRLNFAQIHTVHEESVVAMTEDMPLE#ISYVPSTYLTEITHVSQALSEVEELLNAPD 1901
|
| Sus scrofa |
Query 1665 FAQFRRLNFAQIHTVREETMMVMTEDMPLE#ISYVPSTYLTEITHVSQALSEVEQLLNAPD 1724
|| |||||||||||| ||++||||||||||#|||||| |||||||||||||||||||||||
Sbjct 1959 FAHFRRLNFAQIHTVHEESVMVMTEDMPLE#ISYVPSAYLTEITHVSQALSEVEQLLNAPD 2018
|
| Rattus norvegicus |
Query 1665 FAQFRRLNFAQIHTVREETMMVMTEDMPLE#ISYVPSTYLTEITHVSQALSEVEQLLNAPD 1724
||||||||||||||+ ||||+| ||||||+#+|||||||||||+|+ |||||||||||||+
Sbjct 1619 FAQFRRLNFAQIHTLHEETMVVTTEDMPLD#VSYVPSTYLTEISHILQALSEVEQLLNAPE 1678
|
| Mus musculus |
Query 1665 FAQFRRLNFAQIHTVREETMMVMTEDMPLE#ISYVPSTYLTEITHVSQALSEVEQLLNAPD 1724
||||||||||||||+ ||||+| ||||||+#+|||||||||||+|+ ||||||+ ||| |+
Sbjct 1965 FAQFRRLNFAQIHTLHEETMVVTTEDMPLD#VSYVPSTYLTEISHILQALSEVDHLLNTPE 2024
|
| Monodelphis domestica |
Query 1665 FAQFRRLNFAQIHTVREETMMVMTEDMPLE#ISYVPSTYLTEITHVSQALSEVEQLLNAPD 1724
||||||||+||| |||||| ||||| +|||# ||||||| || |+| +|| | ||| ||
Sbjct 1958 FAQFRRLNYAQIQTVREETTMVMTEGLPLE#TLYVPSTYLAEIHRVTQNISEAEFLLNTPD 2017
|
