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XSB0410 : FLNA protein [Homo sapiens]

[ CaMP Format ]

This entry is computationally expanded from SB0090

* Basic Information

OrganismHomo sapiens (human)
Protein NamesFLNA protein
Gene NamesFLNA
Gene LocusNot available
GO FunctionNot available
Entrez Protein Entrez Nucleotide Entrez Gene UniProt OMIM HGNC HPRD KEGG
AAH67111 N/A 2316 Q6NXF2 300017 N/A N/A hsa:2316

* Information From OMIM

Description: Actin-binding protein, or filamin, is a 280-kD protein that crosslinks actin filaments into orthogonal networks in cortical cytoplasm and participates in the anchoring of membrane proteins for the actin cytoskeleton. Remodeling of the cytoskeleton is central to the modulation of cell shape and migration. Filamin A, encoded by the FLNA gene, is a widely expressed protein that regulates reorganization of the actin cytoskeleton by interacting with integrins, transmembrane receptor complexes, and second messengers.

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* Structure Information

1. Primary Information

Length: 983 aa

Average Mass: 104.164 kDa

Monoisotopic Mass: 104.099 kDa

2. Domain Information

Annotated Domains: interpro / pfam / smart / prosite

Computationally Assigned Domains (Pfam+HMMER):

domain namebeginendscoree-value
Filamin 1. 17372.31.7e-18
--- cleavage 97 ---
Filamin 2. 10919338.82.2e-08
Filamin 3. 198285155.81.3e-43
Filamin 4. 28637225.56.3e-05
Filamin 5. 380467146.48.8e-41
Filamin 6. 48656319.00.00025
Filamin 7. 571658139.88.6e-39
Filamin 8. 66575391.43.2e-24
Filamin 9. 762849127.25.4e-35
Filamin 10. 890979115.32e-31

3. Sequence Information

Fasta Sequence: XSB0410.fasta

Amino Acid Sequence and Secondary Structures (PsiPred):

4. 3D Information

Not Available.

* Cleavage Information

1 [sites]

Cleavage sites (±10aa)

[Site 1] LRSQQLAPQY97-TYAQGGQQTW

Tyr97 Thr

P10 P9 P8 P7 P6 P5 P4 P3 P2 P1
Leu88Arg89Ser90Gln91Gln92Leu93Ala94Pro95Gln96Tyr97
P1' P2' P3' P4' P5' P6' P7' P8' P9' P10'
Thr98Tyr99Ala100Gln101Gly102Gly103Gln104Gln105Thr106Trp107

Sequence conservation (by blast)

* References

[PubMed ID: 12477932] Strausberg RL, Feingold EA, Grouse LH, Derge JG, Klausner RD, Collins FS, Wagner L, Shenmen CM, Schuler GD, Altschul SF, Zeeberg B, Buetow KH, Schaefer CF, Bhat NK, Hopkins RF, Jordan H, Moore T, Max SI, Wang J, Hsieh F, Diatchenko L, Marusina K, Farmer AA, Rubin GM, Hong L, Stapleton M, Soares MB, Bonaldo MF, Casavant TL, Scheetz TE, Brownstein MJ, Usdin TB, Toshiyuki S, Carninci P, Prange C, Raha SS, Loquellano NA, Peters GJ, Abramson RD, Mullahy SJ, Bosak SA, McEwan PJ, McKernan KJ, Malek JA, Gunaratne PH, Richards S, Worley KC, Hale S, Garcia AM, Gay LJ, Hulyk SW, Villalon DK, Muzny DM, Sodergren EJ, Lu X, Gibbs RA, Fahey J, Helton E, Ketteman M, Madan A, Rodrigues S, Sanchez A, Whiting M, Madan A, Young AC, Shevchenko Y, Bouffard GG, Blakesley RW, Touchman JW, Green ED, Dickson MC, Rodriguez AC, Grimwood J, Schmutz J, Myers RM, Butterfield YS, Krzywinski MI, Skalska U, Smailus DE, Schnerch A, Schein JE, Jones SJ, Marra MA, Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.