logo CaMPDB: Calpain for Modulatory Proteolysis Database

XSB0414 : actin [Capsicum annuum]

[ CaMP Format ]

This entry is computationally expanded from SB0071

* Basic Information

OrganismCapsicum annuum
Protein Namesactin
Gene NamesNot available
Gene LocusNot available
GO FunctionNot available
Entrez Protein Entrez Nucleotide Entrez Gene UniProt OMIM HGNC HPRD KEGG
AAS78671 N/A N/A Q6PX70 N/A N/A N/A N/A

* Information From OMIM

Not Available.

* Structure Information

1. Primary Information

Length: 164 aa

Average Mass: 17.985 kDa

Monoisotopic Mass: 17.974 kDa

2. Domain Information

Annotated Domains: interpro / pfam / smart / prosite

Computationally Assigned Domains (Pfam+HMMER):

domain namebeginendscoree-value
Actin 1. 316423.57.9e-16
--- cleavage 38 (inside Actin 3..164) ---

3. Sequence Information

Fasta Sequence: XSB0414.fasta

Amino Acid Sequence and Secondary Structures (PsiPred):

4. 3D Information

Not Available.

* Cleavage Information

1 [sites]

Cleavage sites (±10aa)

[Site 1] RAVFPSIVGR38-PRHTGVMVGM

Arg38 Pro

P10 P9 P8 P7 P6 P5 P4 P3 P2 P1
Arg29Ala30Val31Phe32Pro33Ser34Ile35Val36Gly37Arg38
P1' P2' P3' P4' P5' P6' P7' P8' P9' P10'
Pro39Arg40His41Thr42Gly43Val44Met45Val46Gly47Met48

Sequence conservation (by blast)

* References

[PubMed ID: 19055545] Mateos RM, Bonilla-Valverde D, del Rio LA, Palma JM, Corpas FJ, NADP-dehydrogenases from pepper fruits: effect of maturation. Physiol Plant. 2009 Feb;135(2):130-9. Epub 2008 Nov 14.