XSB0561 : glutamate receptor ionotropic N-methyl-D-aspartate subunit 2A [Saimiri boliviensis]
[ CaMP Format ]
This entry is computationally expanded from SB0072
* Basic Information
| Organism | Saimiri boliviensis (Bolivian squirrel monkey) |
| Protein Names | glutamate receptor ionotropic N-methyl-D-aspartate subunit 2A |
| Gene Names | Not available |
| Gene Locus | Not available |
| GO Function | Not available |
| Entrez Protein |
Entrez Nucleotide |
Entrez Gene |
UniProt |
OMIM |
HGNC |
HPRD |
KEGG |
| AAV74276 |
N/A |
N/A |
Q5IS90 |
N/A |
N/A |
N/A |
N/A |
* Information From OMIM
Not Available.
* Structure Information
1. Primary Information
Length: 1388 aa
Average Mass: 157.263 kDa
Monoisotopic Mass: 157.163 kDa
2. Domain Information
Annotated Domains: interpro / pfam / smart / prosite
Computationally Assigned Domains (Pfam+HMMER):
| domain name | begin | end | score | e-value |
| HS1_rep 1. | 103 | 139 | 7.1 | 2.7 |
| Lig_chan-Glu_bd 1. | 363 | 426 | 80.6 | 5.5e-21 |
| Lig_chan 1. | 478 | 762 | 379.6 | 5.5e-111 |
| NMDAR2_C 1. | 763 | 1388 | 1207.1 | 0 |
| --- cleavage 1253 (inside NMDAR2_C 763..1388) --- |
3. Sequence Information
Fasta Sequence: XSB0561.fasta
Amino Acid Sequence and Secondary Structures (PsiPred):
4. 3D Information
Not Available.
* Cleavage Information
1 [sites]
Cleavage sites (±10aa)
[Site 1] LEGNFYGSLF1253-SVPSSKLSGK
Phe1253 
Ser
 |
| P10 | P9 | P8 | P7 | P6 |
P5 | P4 | P3 | P2 | P1 |
| Leu1244 | Glu1245 | Gly1246 | Asn1247 | Phe1248 | Tyr1249 | Gly1250 | Ser1251 | Leu1252 | Phe1253 |
 |
| P1' | P2' | P3' | P4' | P5' |
P6' | P7' | P8' | P9' | P10' |
| Ser1254 | Val1255 | Pro1256 | Ser1257 | Ser1258 | Lys1259 | Leu1260 | Ser1261 | Gly1262 | Lys1263 |
Sequence conservation (by blast)
Sequence conservation (by blast)
| Reference peptide (cleaved bond±30 residues) |
|---|
|
REIDLSRPSRSISLKDRERLLEGNFYGSLFSVPSSKLSGKKSSLFPQGLEDSKRSKSLLP
|
Summary
| # |
organism |
max score |
hits |
top seq |
| 1 |
Saimiri boliviensis |
94.70 |
1 |
glutamate receptor ionotropic N-methyl-D-aspartate |
| 2 |
Homo sapiens |
94.00 |
2 |
N-methyl-D-aspartate receptor subunit 2A precursor |
| 3 |
N/A |
94.00 |
2 |
2 |
| 4 |
Pan troglodytes |
94.00 |
1 |
N-methyl-D-aspartate receptor subunit 2A |
| 5 |
Rattus norvegicus |
92.40 |
3 |
N-methyl-D-aspartate receptor subunit |
| 6 |
NMDA |
92.40 |
1 |
NMDE1_RAT Glutamate |
| 7 |
Mus musculus |
92.40 |
1 |
glutamate receptor, ionotropic, NMDA2A (epsilon 1) |
| 8 |
Canis familiaris |
89.40 |
1 |
PREDICTED: similar to glutamate receptor, ionotrop |
| 9 |
Bos taurus |
84.30 |
1 |
PREDICTED: similar to N-methyl-D-aspartate recepto |
| 10 |
Monodelphis domestica |
81.60 |
1 |
PREDICTED: similar to N-methyl-D-aspartate recepto |
| 11 |
Gallus gallus |
65.50 |
1 |
PREDICTED: similar to N-methyl-D-aspartate recepto |
| 12 |
Danio rerio |
57.40 |
2 |
novel protein similar to vertebrate glutamate rece |
Top-ranked sequences
| organism | matching |
|---|
| Saimiri boliviensis |
Query 1224 REIDLSRPSRSISLKDRERLLEGNFYGSLF#SVPXXXXXXXXXXXFPQGLEDSKRSKSLLP 1283
||||||||||||||||||||||||||||||#||| ||||||||||||||||
Sbjct 1224 REIDLSRPSRSISLKDRERLLEGNFYGSLF#SVPSSKLSGKKSSLFPQGLEDSKRSKSLLP 1283
|
| Homo sapiens |
Query 1224 REIDLSRPSRSISLKDRERLLEGNFYGSLF#SVPXXXXXXXXXXXFPQGLEDSKRSKSLLP 1283
||+|||||||||||||||||||||||||||#||| ||||||||||||||||
Sbjct 1300 RELDLSRPSRSISLKDRERLLEGNFYGSLF#SVPSSKLSGKKSSLFPQGLEDSKRSKSLLP 1359
|
| N/A |
Query 1224 REIDLSRPSRSISLKDRERLLEGNFYGSLF#SVPXXXXXXXXXXXFPQGLEDSKRSKSLLP 1283
||+|||||||||||||||||||||||||||#||| ||||||||||||||||
Sbjct 1300 RELDLSRPSRSISLKDRERLLEGNFYGSLF#SVPSSKLSGKKSSLFPQGLEDSKRSKSLLP 1359
|
| Pan troglodytes |
Query 1224 REIDLSRPSRSISLKDRERLLEGNFYGSLF#SVPXXXXXXXXXXXFPQGLEDSKRSKSLLP 1283
||+|||||||||||||||||||||||||||#||| ||||||||||||||||
Sbjct 1300 RELDLSRPSRSISLKDRERLLEGNFYGSLF#SVPSSKLSGKKSSLFPQGLEDSKRSKSLLP 1359
|
| Rattus norvegicus |
Query 1224 REIDLSRPSRSISLKDRERLLEGNFYGSLF#SVPXXXXXXXXXXXFPQGLEDSKRSKSLLP 1283
|||||||||||||||||||||||| |||||#||| ||||||||||||||||
Sbjct 1300 REIDLSRPSRSISLKDRERLLEGNLYGSLF#SVPSSKLLGNKSSLFPQGLEDSKRSKSLLP 1359
|
| NMDA |
Query 1224 REIDLSRPSRSISLKDRERLLEGNFYGSLF#SVPXXXXXXXXXXXFPQGLEDSKRSKSLLP 1283
|||||||||||||||||||||||| |||||#||| ||||||||||||||||
Sbjct 1300 REIDLSRPSRSISLKDRERLLEGNLYGSLF#SVPSSKLLGNKSSLFPQGLEDSKRSKSLLP 1359
|
| Mus musculus |
Query 1224 REIDLSRPSRSISLKDRERLLEGNFYGSLF#SVPXXXXXXXXXXXFPQGLEDSKRSKSLLP 1283
|||||||||||||||||||||||| |||||#||| ||||||||||||||||
Sbjct 1300 REIDLSRPSRSISLKDRERLLEGNLYGSLF#SVPSSKLLGNKSSLFPQGLEDSKRSKSLLP 1359
|
| Canis familiaris |
Query 1224 REIDLSRPSRSISLKDRERLLEGNFYGSLF#SVPXXXXXXXXXXXFPQGLEDSKRSKSLLP 1283
||+||||||||||||||||||||| |||||#||| ||||||| ||||||||
Sbjct 1300 REMDLSRPSRSISLKDRERLLEGNLYGSLF#SVPSSKLSGNKSSLFPQGLEDRKRSKSLLP 1359
|
| Bos taurus |
Query 1224 REIDLSRPSRSISLKDRERLLEGNFYGSLF#SVPXXXXXXXXXXXFPQGLEDSKRSKSLLP 1283
||+| ||||||||||||||||||| |||||#||| |||||| ||||||||
Sbjct 1072 REVDPSRPSRSISLKDRERLLEGNLYGSLF#SVPSSKLAGNKGSLFPQGLEVGKRSKSLLP 1131
|
| Monodelphis domestica |
Query 1224 REIDLSRPSRSISLKDRERLLEGNFYGSLF#SVPXXXXXXXXXXXFPQGLEDSKRSKSLLP 1283
||||| ||||||||||+||||||| |||||#||| | | |||+|||||| |
Sbjct 1305 REIDLGRPSRSISLKDKERLLEGNLYGSLF#SVPSSKLLGNKGSLFSQALEDTKRSKSLFP 1364
|
| Gallus gallus |
Query 1224 REIDLSRPSRSISLKDRERLLEGNFYGSLF#SVPXXXXXXXXXXXFPQGLEDSKRSKSLLP 1283
||||| ||||||||||+|+ |+ + | |+|#||| |||||||||| |
Sbjct 1294 REIDLGRPSRSISLKDKEKFLQSSPYASMF#SVPSSKLLSNKASLLTHALEDSKRSKSLYP 1353
|
| Danio rerio |
Query 1224 REIDLSRPSRSISLKDRERLLEGNFYGSLF#SVPXXXXXXXXXXXFPQGLEDSKRSKSLLP 1283
+||||+||+||+|||+++| || + | ++|#++ | + ||+||||||| |
Sbjct 1159 KEIDLNRPARSVSLKEKDRFLEDSPYANMF#NIKADKLFGSRSMLFNRNLEESKRSKSLYP 1218
|
