XSB0802 : unnamed protein product [Mus musculus]
[ CaMP Format ]
This entry is computationally expanded from SB0056
* Basic Information
| Organism | Mus musculus (house mouse) |
| Protein Names | Putative uncharacterized protein |
| Gene Names | Atp2b2 |
| Gene Locus | Not available |
| GO Function | Not available |
* Information From OMIM
Not Available.
* Structure Information
1. Primary Information
Length: 1194 aa
Average Mass: 132.106 kDa
Monoisotopic Mass: 132.022 kDa
2. Domain Information
Annotated Domains: interpro / pfam / smart / prosite
Computationally Assigned Domains (Pfam+HMMER):
| domain name | begin | end | score | e-value |
|---|---|---|---|---|
| Cation_ATPase_N 1. | 41 | 124 | 75.0 | 2.8e-19 |
| E1-E2_ATPase 1. | 156 | 444 | 225.1 | 1.8e-64 |
| Hydrolase 1. | 448 | 792 | 38.0 | 3.6e-08 |
| Cation_ATPase_C 1. | 853 | 1035 | 210.7 | 3.8e-60 |
3. Sequence Information
Fasta Sequence: XSB0802.fasta
Amino Acid Sequence and Secondary Structures (PsiPred):
4. 3D Information
Not Available.
* Cleavage Information
1 [sites]
Cleavage sites (±10aa)
[Site 1] GQILWFRGLN1086-RIQTQIRVVK
Asn1086 
Arg
 |
|||||||||
| P10 | P9 | P8 | P7 | P6 | P5 | P4 | P3 | P2 | P1 |
|---|---|---|---|---|---|---|---|---|---|
| Gly1077 | Gln1078 | Ile1079 | Leu1080 | Trp1081 | Phe1082 | Arg1083 | Gly1084 | Leu1085 | Asn1086 |
 |
|||||||||
| P1' | P2' | P3' | P4' | P5' | P6' | P7' | P8' | P9' | P10' |
| Arg1087 | Ile1088 | Gln1089 | Thr1090 | Gln1091 | Ile1092 | Arg1093 | Val1094 | Val1095 | Lys1096 |
Sequence conservation (by blast)
Sequence conservation (by blast)
| Reference peptide (cleaved bond±30 residues) |
|---|
| EEELNEDVEEIDHAERELRRGQILWFRGLNRIQTQIRVVKAFRSSLYEGLEKPESRTSIH |
Summary
| # | organism | max score | hits | top seq |
|---|---|---|---|---|
| 1 | Canis familiaris | 102.00 | 103 | PREDICTED: similar to plasma membrane calcium ATPa |
| 2 | N/A | 102.00 | 39 | - |
| 3 | Homo sapiens | 102.00 | 27 | plasma membrane calcium ATPase 2 isoform 2 |
| 4 | Mus musculus | 102.00 | 12 | unnamed protein product |
| 5 | Bos taurus | 102.00 | 12 | PREDICTED: similar to plasma membrane calcium ATPa |
| 6 | Pan troglodytes | 102.00 | 11 | PREDICTED: plasma membrane calcium ATPase 2 isofor |
| 7 | Gallus gallus | 102.00 | 9 | PREDICTED: similar to plasma membrane calcium ATPa |
| 8 | Macaca mulatta | 102.00 | 9 | PREDICTED: plasma membrane calcium ATPase 2, parti |
| 9 | Rattus norvegicus | 102.00 | 5 | ATPase, Ca++ transporting, plasma membrane 2 |
| 10 | Danio rerio | 100.00 | 4 | PREDICTED: hypothetical protein, partial |
| 11 | Monodelphis domestica | 99.40 | 3 | PREDICTED: similar to plasma membrane calcium ATPa |
| 12 | Rana catesbeiana | 99.40 | 2 | PMCA1bx |
| 13 | Sus scrofa | 99.40 | 2 | plasma membrane calcium ATPase 1 |
| 14 | Tetraodon nigroviridis | 98.20 | 4 | unnamed protein product |
| 15 | Oryctolagus cuniculus | 92.80 | 1 | Ca2+/Mg2+ ATPase |
| 16 | rats, ROS 17/2.8 osteosarcoma cells, Peptide Partial, 123 aa | 89.00 | 1 | plasma membrane Ca(2+)-ATPase PMCA1b isoform {alte |
| 17 | synthetic construct | 83.60 | 2 | hypothetical protein |
| 18 | Pongo pygmaeus | 75.50 | 1 | hypothetical protein |
| 19 | Procambarus clarkii | 67.40 | 1 | plasma membrane calcium ATPase PMCA3 |
| 20 | Xenopus laevis | 66.60 | 1 | ATPase, Ca++ transporting, plasma membrane 3 |
Top-ranked sequences
| organism | matching |
|---|---|
| Canis familiaris | Query 1067 IDHAERELRRGQILWFRGLN#RIQTQIRVVKAFRSSLYEGLEKPESRTSIH 1116 ||||||||||||||||||||#|||||||||||||||||||||||||||||| Query 1067 IDHAERELRRGQILWFRGLN#RIQTQIRVVKAFRSSLYEGLEKPESRTSIH 1116 |
| N/A | Query 1067 IDHAERELRRGQILWFRGLN#RIQTQIRVVKAFRSSLYEGLEKPESRTSIH 1116 ||||||||||||||||||||#|||||||||||||||||||||||||||||| Query 1067 IDHAERELRRGQILWFRGLN#RIQTQIRVVKAFRSSLYEGLEKPESRTSIH 1116 |
| Homo sapiens | Query 1067 IDHAERELRRGQILWFRGLN#RIQTQIRVVKAFRSSLYEGLEKPESRTSIH 1116 ||||||||||||||||||||#|||||||||||||||||||||||||||||| Query 1067 IDHAERELRRGQILWFRGLN#RIQTQIRVVKAFRSSLYEGLEKPESRTSIH 1116 |
| Mus musculus | Query 1067 IDHAERELRRGQILWFRGLN#RIQTQIRVVKAFRSSLYEGLEKPESRTSIH 1116 ||||||||||||||||||||#|||||||||||||||||||||||||||||| Query 1067 IDHAERELRRGQILWFRGLN#RIQTQIRVVKAFRSSLYEGLEKPESRTSIH 1116 |
| Bos taurus | Query 1067 IDHAERELRRGQILWFRGLN#RIQTQIRVVKAFRSSLYEGLEKPESRTSIH 1116 ||||||||||||||||||||#|||||||||||||||||||||||||||||| Query 1067 IDHAERELRRGQILWFRGLN#RIQTQIRVVKAFRSSLYEGLEKPESRTSIH 1116 |
| Pan troglodytes | Query 1067 IDHAERELRRGQILWFRGLN#RIQTQIRVVKAFRSSLYEGLEKPESRTSIH 1116 ||||||||||||||||||||#|||||||||||||||||||||||||||||| Query 1067 IDHAERELRRGQILWFRGLN#RIQTQIRVVKAFRSSLYEGLEKPESRTSIH 1116 |
| Gallus gallus | Query 1067 IDHAERELRRGQILWFRGLN#RIQTQIRVVKAFRSSLYEGLEKPESRTSIH 1116 ||||||||||||||||||||#|||||||||||||||||||||||||||||| Query 1067 IDHAERELRRGQILWFRGLN#RIQTQIRVVKAFRSSLYEGLEKPESRTSIH 1116 |
| Macaca mulatta | Query 1067 IDHAERELRRGQILWFRGLN#RIQTQIRVVKAFRSSLYEGLEKPESRTSIH 1116 ||||||||||||||||||||#|||||||||||||||||||||||||||||| Query 1067 IDHAERELRRGQILWFRGLN#RIQTQIRVVKAFRSSLYEGLEKPESRTSIH 1116 |
| Rattus norvegicus | Query 1067 IDHAERELRRGQILWFRGLN#RIQTQIRVVKAFRSSLYEGLEKPESRTSIH 1116 ||||||||||||||||||||#|||||||||||||||||||||||||||||| Query 1067 IDHAERELRRGQILWFRGLN#RIQTQIRVVKAFRSSLYEGLEKPESRTSIH 1116 |
| Danio rerio | Query 1067 IDHAERELRRGQILWFRGLN#RIQTQIRVVKAFRSSLYEGLEKPESRTSIH 1116 ||||||||||||||||||||#||||||||| |||||||||||||||||||| Sbjct 314 IDHAERELRRGQILWFRGLN#RIQTQIRVVNAFRSSLYEGLEKPESRTSIH 363 |
| Monodelphis domestica | Query 1067 IDHAERELRRGQILWFRGLN#RIQTQIRVVKAFRSSLYEGLEKPESRTSIH 1116 ||||||||||||||||||||#||||||||| ||||||||||||||||+||| Sbjct 1080 IDHAERELRRGQILWFRGLN#RIQTQIRVVNAFRSSLYEGLEKPESRSSIH 1129 |
| Rana catesbeiana | Query 1067 IDHAERELRRGQILWFRGLN#RIQTQIRVVKAFRSSLYEGLEKPESRTSIH 1116 ||||||||||||||||||||#||||||||| ||||||||||||||||+||| Sbjct 1087 IDHAERELRRGQILWFRGLN#RIQTQIRVVNAFRSSLYEGLEKPESRSSIH 1136 |
| Sus scrofa | Query 1067 IDHAERELRRGQILWFRGLN#RIQTQIRVVKAFRSSLYEGLEKPESRTSIH 1116 ||||||||||||||||||||#||||||||| ||||||||||||||||+||| Sbjct 1093 IDHAERELRRGQILWFRGLN#RIQTQIRVVNAFRSSLYEGLEKPESRSSIH 1142 |
| Tetraodon nigroviridis | Query 1067 IDHAERELRRGQILWFRGLN#RIQTQIRVVKAFRSSLYEGLEKPESRTSIH 1116 ||||||||||||||||||||#||||||||| |||||||||||||+||+||| Sbjct 309 IDHAERELRRGQILWFRGLN#RIQTQIRVVNAFRSSLYEGLEKPDSRSSIH 358 |
| Oryctolagus cuniculus | Query 1067 IDHAERELRRGQILWFRGLN#RIQTQIRVVKAFRSSLYEGLEKPESRTSIH 1116 | |||||||| |||||||||#||||||||| ||||||||||||||||+||| Sbjct 1093 IVHAERELRRWQILWFRGLN#RIQTQIRVVNAFRSSLYEGLEKPESRSSIH 1142 |
| rats, ROS 17/2.8 osteosarcoma cells, Peptide Partial, 123 aa | Query 1072 RELRRGQILWFRGLN#RIQTQIRVVKAFRSSLYEGLEKPESRTSIH 1116 |||||||||||||||#||||||||| ||||||||||||||||+||| Sbjct 1 RELRRGQILWFRGLN#RIQTQIRVVNAFRSSLYEGLEKPESRSSIH 45 |
| synthetic construct | Query 1067 IDHAERELRRGQILWFRGLN#RIQTQIRVVKAFRSSLYEGLEKPESRTSIH 1116 ||||| ||||||||||||||#||||||+||||| |||+| ++|| ++ ||| Sbjct 1079 IDHAEMELRRGQILWFRGLN#RIQTQIKVVKAFHSSLHESIQKPYNQKSIH 1128 |
| Pongo pygmaeus | Query 1067 IDHAERELRRGQILWFRGLN#RIQTQ----------------------------------- 1091 ||||||||||||||||||||#||||| Sbjct 171 IDHAERELRRGQILWFRGLN#RIQTQMDVVNAFQSGSSIQGALRRQPSIASQHHDVTNIST 230 Query 1092 ----------------IRVVKAFRSSLYEGLEKPESRTSIH 1116 |||| ||||||||||||||||+||| Sbjct 231 PTHVVFSSSTASTTVGIRVVNAFRSSLYEGLEKPESRSSIH 271 |
| Procambarus clarkii | Query 1067 IDHAERELRRGQILWFRGLN#RIQTQIRVVKAFR--SSLYEGLEKPES 1111 ||||||||||||||||||||#|||||| || ||+ ||+ + +| | Sbjct 1119 IDHAERELRRGQILWFRGLN#RIQTQIEVVNAFKSGSSVQGAVRRPSS 1165 |
| Xenopus laevis | Query 1067 IDHAERELRRGQILWFRGLN#RIQTQIRVVKAFRS-SLYEGLEKPESRTS 1114 ||||||||||||||||||||#|||||| || |+| + ++| + +| |+ Sbjct 1119 IDHAERELRRGQILWFRGLN#RIQTQIEVVNTFKSGASFQGALRRQSSTT 1167 |
* References
[PubMed ID: 10349636] Carninci P, Hayashizaki Y, High-efficiency full-length cDNA cloning. Methods Enzymol. 1999;303:19-44.
[PubMed ID: 11042159] ... Carninci P, Shibata Y, Hayatsu N, Sugahara Y, Shibata K, Itoh M, Konno H, Okazaki Y, Muramatsu M, Hayashizaki Y, Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes. Genome Res. 2000 Oct;10(10):1617-30.
[PubMed ID: 11076861] ... Shibata K, Itoh M, Aizawa K, Nagaoka S, Sasaki N, Carninci P, Konno H, Akiyama J, Nishi K, Kitsunai T, Tashiro H, Itoh M, Sumi N, Ishii Y, Nakamura S, Hazama M, Nishine T, Harada A, Yamamoto R, Matsumoto H, Sakaguchi S, Ikegami T, Kashiwagi K, Fujiwake S, Inoue K, Togawa Y, RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Genome Res. 2000 Nov;10(11):1757-71.
[PubMed ID: 11217851] ... Kawai J, Shinagawa A, Shibata K, Yoshino M, Itoh M, Ishii Y, Arakawa T, Hara A, Fukunishi Y, Konno H, Adachi J, Fukuda S, Aizawa K, Izawa M, Nishi K, Kiyosawa H, Kondo S, Yamanaka I, Saito T, Okazaki Y, Gojobori T, Bono H, Kasukawa T, Saito R, Kadota K, Matsuda H, Ashburner M, Batalov S, Casavant T, Fleischmann W, Gaasterland T, Gissi C, King B, Kochiwa H, Kuehl P, Lewis S, Matsuo Y, Nikaido I, Pesole G, Quackenbush J, Schriml LM, Staubli F, Suzuki R, Tomita M, Wagner L, Washio T, Sakai K, Okido T, Furuno M, Aono H, Baldarelli R, Barsh G, Blake J, Boffelli D, Bojunga N, Carninci P, de Bonaldo MF, Brownstein MJ, Bult C, Fletcher C, Fujita M, Gariboldi M, Gustincich S, Hill D, Hofmann M, Hume DA, Kamiya M, Lee NH, Lyons P, Marchionni L, Mashima J, Mazzarelli J, Mombaerts P, Nordone P, Ring B, Ringwald M, Rodriguez I, Sakamoto N, Sasaki H, Sato K, Schonbach C, Seya T, Shibata Y, Storch KF, Suzuki H, Toyo-oka K, Wang KH, Weitz C, Whittaker C, Wilming L, Wynshaw-Boris A, Yoshida K, Hasegawa Y, Kawaji H, Kohtsuki S, Hayashizaki Y, Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90.
[PubMed ID: 12466851] ... Okazaki Y, Furuno M, Kasukawa T, Adachi J, Bono H, Kondo S, Nikaido I, Osato N, Saito R, Suzuki H, Yamanaka I, Kiyosawa H, Yagi K, Tomaru Y, Hasegawa Y, Nogami A, Schonbach C, Gojobori T, Baldarelli R, Hill DP, Bult C, Hume DA, Quackenbush J, Schriml LM, Kanapin A, Matsuda H, Batalov S, Beisel KW, Blake JA, Bradt D, Brusic V, Chothia C, Corbani LE, Cousins S, Dalla E, Dragani TA, Fletcher CF, Forrest A, Frazer KS, Gaasterland T, Gariboldi M, Gissi C, Godzik A, Gough J, Grimmond S, Gustincich S, Hirokawa N, Jackson IJ, Jarvis ED, Kanai A, Kawaji H, Kawasawa Y, Kedzierski RM, King BL, Konagaya A, Kurochkin IV, Lee Y, Lenhard B, Lyons PA, Maglott DR, Maltais L, Marchionni L, McKenzie L, Miki H, Nagashima T, Numata K, Okido T, Pavan WJ, Pertea G, Pesole G, Petrovsky N, Pillai R, Pontius JU, Qi D, Ramachandran S, Ravasi T, Reed JC, Reed DJ, Reid J, Ring BZ, Ringwald M, Sandelin A, Schneider C, Semple CA, Setou M, Shimada K, Sultana R, Takenaka Y, Taylor MS, Teasdale RD, Tomita M, Verardo R, Wagner L, Wahlestedt C, Wang Y, Watanabe Y, Wells C, Wilming LG, Wynshaw-Boris A, Yanagisawa M, Yang I, Yang L, Yuan Z, Zavolan M, Zhu Y, Zimmer A, Carninci P, Hayatsu N, Hirozane-Kishikawa T, Konno H, Nakamura M, Sakazume N, Sato K, Shiraki T, Waki K, Kawai J, Aizawa K, Arakawa T, Fukuda S, Hara A, Hashizume W, Imotani K, Ishii Y, Itoh M, Kagawa I, Miyazaki A, Sakai K, Sasaki D, Shibata K, Shinagawa A, Yasunishi A, Yoshino M, Waterston R, Lander ES, Rogers J, Birney E, Hayashizaki Y, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002 Dec 5;420(6915):563-73.
[PubMed ID: 16141072] ... Carninci P, Kasukawa T, Katayama S, Gough J, Frith MC, Maeda N, Oyama R, Ravasi T, Lenhard B, Wells C, Kodzius R, Shimokawa K, Bajic VB, Brenner SE, Batalov S, Forrest AR, Zavolan M, Davis MJ, Wilming LG, Aidinis V, Allen JE, Ambesi-Impiombato A, Apweiler R, Aturaliya RN, Bailey TL, Bansal M, Baxter L, Beisel KW, Bersano T, Bono H, Chalk AM, Chiu KP, Choudhary V, Christoffels A, Clutterbuck DR, Crowe ML, Dalla E, Dalrymple BP, de Bono B, Della Gatta G, di Bernardo D, Down T, Engstrom P, Fagiolini M, Faulkner G, Fletcher CF, Fukushima T, Furuno M, Futaki S, Gariboldi M, Georgii-Hemming P, Gingeras TR, Gojobori T, Green RE, Gustincich S, Harbers M, Hayashi Y, Hensch TK, Hirokawa N, Hill D, Huminiecki L, Iacono M, Ikeo K, Iwama A, Ishikawa T, Jakt M, Kanapin A, Katoh M, Kawasawa Y, Kelso J, Kitamura H, Kitano H, Kollias G, Krishnan SP, Kruger A, Kummerfeld SK, Kurochkin IV, Lareau LF, Lazarevic D, Lipovich L, Liu J, Liuni S, McWilliam S, Madan Babu M, Madera M, Marchionni L, Matsuda H, Matsuzawa S, Miki H, Mignone F, Miyake S, Morris K, Mottagui-Tabar S, Mulder N, Nakano N, Nakauchi H, Ng P, Nilsson R, Nishiguchi S, Nishikawa S, Nori F, Ohara O, Okazaki Y, Orlando V, Pang KC, Pavan WJ, Pavesi G, Pesole G, Petrovsky N, Piazza S, Reed J, Reid JF, Ring BZ, Ringwald M, Rost B, Ruan Y, Salzberg SL, Sandelin A, Schneider C, Schonbach C, Sekiguchi K, Semple CA, Seno S, Sessa L, Sheng Y, Shibata Y, Shimada H, Shimada K, Silva D, Sinclair B, Sperling S, Stupka E, Sugiura K, Sultana R, Takenaka Y, Taki K, Tammoja K, Tan SL, Tang S, Taylor MS, Tegner J, Teichmann SA, Ueda HR, van Nimwegen E, Verardo R, Wei CL, Yagi K, Yamanishi H, Zabarovsky E, Zhu S, Zimmer A, Hide W, Bult C, Grimmond SM, Teasdale RD, Liu ET, Brusic V, Quackenbush J, Wahlestedt C, Mattick JS, Hume DA, Kai C, Sasaki D, Tomaru Y, Fukuda S, Kanamori-Katayama M, Suzuki M, Aoki J, Arakawa T, Iida J, Imamura K, Itoh M, Kato T, Kawaji H, Kawagashira N, Kawashima T, Kojima M, Kondo S, Konno H, Nakano K, Ninomiya N, Nishio T, Okada M, Plessy C, Shibata K, Shiraki T, Suzuki S, Tagami M, Waki K, Watahiki A, Okamura-Oho Y, Suzuki H, Kawai J, Hayashizaki Y, The transcriptional landscape of the mammalian genome. Science. 2005 Sep 2;309(5740):1559-63.
[PubMed ID: 16141073] ... Katayama S, Tomaru Y, Kasukawa T, Waki K, Nakanishi M, Nakamura M, Nishida H, Yap CC, Suzuki M, Kawai J, Suzuki H, Carninci P, Hayashizaki Y, Wells C, Frith M, Ravasi T, Pang KC, Hallinan J, Mattick J, Hume DA, Lipovich L, Batalov S, Engstrom PG, Mizuno Y, Faghihi MA, Sandelin A, Chalk AM, Mottagui-Tabar S, Liang Z, Lenhard B, Wahlestedt C, Antisense transcription in the mammalian transcriptome. Science. 2005 Sep 2;309(5740):1564-6.