XSB0957 : unnamed protein product [Mus musculus]
[ CaMP Format ]
This entry is computationally expanded from SB0066
* Basic Information
| Organism | Mus musculus (house mouse) |
| Protein Names | Putative uncharacterized protein |
| Gene Names | Tnnt2 |
| Gene Locus | Not available |
| GO Function | Not available |
* Information From OMIM
Not Available.
* Structure Information
1. Primary Information
Length: 298 aa
Average Mass: 0.000 kDa
Monoisotopic Mass: 0.000 kDa
2. Domain Information
Annotated Domains: interpro / pfam / smart / prosite
Computationally Assigned Domains (Pfam+HMMER):
| domain name | begin | end | score | e-value |
|---|---|---|---|---|
| --- cleavage 81 --- | ||||
| Troponin 1. | 106 | 247 | 169.3 | 1.1e-47 |
3. Sequence Information
Fasta Sequence: XSB0957.fasta
Amino Acid Sequence and Secondary Structures (PsiPred):
4. 3D Information
Not Available.
* Cleavage Information
1 [sites]
Cleavage sites (±10aa)
[Site 1] VEDTKPKPSR81-LFMPNLVPPK
Arg81 
Leu
 |
|||||||||
| P10 | P9 | P8 | P7 | P6 | P5 | P4 | P3 | P2 | P1 |
|---|---|---|---|---|---|---|---|---|---|
| Val72 | Glu73 | Asp74 | Thr75 | Lys76 | Pro77 | Lys78 | Pro79 | Ser80 | Arg81 |
 |
|||||||||
| P1' | P2' | P3' | P4' | P5' | P6' | P7' | P8' | P9' | P10' |
| Leu82 | Phe83 | Met84 | Pro85 | Asn86 | Leu87 | Val88 | Pro89 | Pro90 | Lys91 |
Sequence conservation (by blast)
Sequence conservation (by blast)
| Reference peptide (cleaved bond±30 residues) |
|---|
| EANVEEVGPDEEAKDAEEGPVEDTKPKPSRLFMPNLVPPKIPDGERVDFDDIHRKRVEKD |
Summary
| # | organism | max score | hits | top seq |
|---|---|---|---|---|
| 1 | Mus musculus | 127.00 | 35 | unnamed protein product |
| 2 | Rattus norvegicus | 116.00 | 48 | troponin T2, cardiac |
| 3 | N/A | 116.00 | 18 | B |
| 4 | Cavia porcellus | 100.00 | 6 | cardiac troponin 2 embryonic #1 isoform |
| 5 | Felis catus | 99.00 | 2 | cardiac troponin T |
| 6 | Macaca mulatta | 98.60 | 6 | PREDICTED: similar to Troponin T, cardiac muscle ( |
| 7 | Canis familiaris | 96.30 | 6 | troponin T isoform 1 |
| 8 | Canis lupus familiaris | 96.30 | 1 | troponin T type 2, cardiac |
| 9 | Homo sapiens | 95.50 | 34 | troponin T type 2 (cardiac), isoform CRA_c |
| 10 | Pan troglodytes | 95.50 | 12 | PREDICTED: similar to troponin T type 2, cardiac i |
| 11 | Oryctolagus cuniculus | 94.70 | 1 | AAB51160.1 |
| 12 | Monodelphis domestica | 94.00 | 2 | PREDICTED: similar to cardiac troponin T |
| 13 | Bos taurus | 90.90 | 5 | troponin T type 2, cardiac |
| 14 | Xenopus laevis | 77.80 | 11 | Unknown (protein for MGC:132283) |
| 15 | Danio rerio | 77.40 | 17 | troponin T1, skeletal, slow |
| 16 | Sus scrofa | 75.90 | 8 | troponin T slow type isoform sTnT2 |
| 17 | synthetic construct | 75.90 | 3 | troponin T1, skeletal, slow |
| 18 | Meleagris gallopavo | 73.90 | 2 | cardiac troponin T isoform |
| 19 | Gallus gallus | 72.00 | 3 | troponin T type 2, cardiac |
| 20 | Sparus aurata | 71.60 | 4 | skeletal troponin T |
| 21 | Bufo marinus | 71.20 | 2 | high molecular weight slow troponin T |
| 22 | Tetraodon nigroviridis | 68.60 | 4 | unnamed protein product |
| 23 | Salmo trutta | 61.20 | 1 | slow myotomal muscle troponin-T isoform 1S |
| 24 | Hyla chrysoscelis | 56.20 | 1 | troponin T |
| 25 | Coturnix japonica | 54.70 | 12 | fast troponin T isoform |
| 26 | Xenopus tropicalis | 54.70 | 2 | troponin T3, skeletal, fast |
| 27 | human, familial hypertrophic cardiomyopathy, family AW, Peptide Partial Mutant, 25 aa | 53.50 | 1 | troponin T {Ile79Asn} |
| 28 | rabbits, skeletal muscle, Peptide, 249 aa | 52.80 | 1 | troponin T beta isoform, TnT beta isoform, TnT-5 { |
| 29 | Halocynthia roretzi | 49.30 | 1 | troponin T |
Top-ranked sequences
| organism | matching |
|---|---|
| Mus musculus | Query 52 EANVEEVGPDEEAKDAEEGPVEDTKPKPSR#LFMPNLVPPKIPDGERVDFDDIHRKRVEKD 111 ||||||||||||||||||||||||||||||#|||||||||||||||||||||||||||||| Query 52 EANVEEVGPDEEAKDAEEGPVEDTKPKPSR#LFMPNLVPPKIPDGERVDFDDIHRKRVEKD 111 |
| Rattus norvegicus | Query 52 EANVEEVGPDEEAKDAEEGPVEDTKPKPSR#LFMPNLVPPKIPDGERVDFDDIHRKRVEKD 111 | |||||||||+|||+|||||+||||||#||||||||||||||||||||||||||+||| Sbjct 51 EDKAEEVGPDEEARDAEDGPVEDSKPKPSR#LFMPNLVPPKIPDGERVDFDDIHRKRMEKD 110 |
| N/A | Query 52 EANVEEVGPDEEAKDAEEGPVEDTKPKPSR#LFMPNLVPPKIPDGERVDFDDIHRKRVEKD 111 | |||||||||+|||+|||||+||||||#||||||||||||||||||||||||||+||| Sbjct 49 EDKAEEVGPDEEARDAEDGPVEDSKPKPSR#LFMPNLVPPKIPDGERVDFDDIHRKRMEKD 108 |
| Cavia porcellus | Query 52 EANVEEVGPDEEAKDAEEGPVEDTKPKPSR#LFMPNLVPPKIPDGERVDFDDIHRKRVEKD 111 || || | +|| ++||+||||++|||| |#||||||||||||||||||||||||||+||| Sbjct 50 EAKAEEDGEEEEGREAEDGPVEESKPKP-R#LFMPNLVPPKIPDGERVDFDDIHRKRMEKD 108 |
| Felis catus | Query 52 EANVEEVGPDEEAKDAEEGPVEDTKPKPSR#LFMPNLVPPKIPDGERVDFDDIHRKRVEKD 111 | ||| | +||||+ |+||||++|||| |# |||||||||||||||||||||||||+||| Sbjct 49 ETNVEGDGQEEEAKETEDGPVEESKPKP-R#PFMPNLVPPKIPDGERVDFDDIHRKRMEKD 107 |
| Macaca mulatta | Query 52 EANVEEVGPDEEAKDAEEGPVEDTKPKPSR#LFMPNLVPPKIPDGERVDFDDIHRKRVEKD 111 | || | +||||+||+||+|++|||| |# |||||||||||||||||||||||||+||| Sbjct 143 ETRAEEDGEEEEAKEAEDGPMEESKPKP-R#SFMPNLVPPKIPDGERVDFDDIHRKRMEKD 201 |
| Canis familiaris | Query 52 EANVEEVGPDEEAKDAEEGPVEDTKPKPSR#LFMPNLVPPKIPDGERVDFDDIHRKRVEKD 111 | | | | + |||+||+||||++|||| |# |||||||||||||||||||||||||+||| Sbjct 49 ETNAEGDGQEGEAKEAEDGPVEESKPKP-R#PFMPNLVPPKIPDGERVDFDDIHRKRMEKD 107 |
| Canis lupus familiaris | Query 52 EANVEEVGPDEEAKDAEEGPVEDTKPKPSR#LFMPNLVPPKIPDGERVDFDDIHRKRVEKD 111 | | | | + |||+||+||||++|||| |# |||||||||||||||||||||||||+||| Sbjct 35 ETNAEGDGQEGEAKEAEDGPVEESKPKP-R#PFMPNLVPPKIPDGERVDFDDIHRKRMEKD 93 |
| Homo sapiens | Query 52 EANVEEVGPDEEAKDAEEGPVEDTKPKPSR#LFMPNLVPPKIPDGERVDFDDIHRKRVEKD 111 | || +||||+||+||+|++|||| |# |||||||||||||||||||||||||+||| Sbjct 50 ETRAEEDEEEEEAKEAEDGPMEESKPKP-R#SFMPNLVPPKIPDGERVDFDDIHRKRMEKD 108 |
| Pan troglodytes | Query 52 EANVEEVGPDEEAKDAEEGPVEDTKPKPSR#LFMPNLVPPKIPDGERVDFDDIHRKRVEKD 111 | || +||||+||+||+|++|||| |# |||||||||||||||||||||||||+||| Sbjct 50 ETRAEEDEEEEEAKEAEDGPMEESKPKP-R#SFMPNLVPPKIPDGERVDFDDIHRKRMEKD 108 |
| Oryctolagus cuniculus | Query 52 EANVEEVGPDEEAKDAEEGPVEDTKPKPSR#LFMPNLVPPKIPDGERVDFDDIHRKRVEKD 111 | || | +|| |+ |+||||++|||| |# |||||||||||||||||||||||||+||| Sbjct 60 ETQAEEDGQEEEDKEDEDGPVEESKPKP-R#PFMPNLVPPKIPDGERVDFDDIHRKRMEKD 118 |
| Monodelphis domestica | Query 52 EANVEEVGPDEEAKDAEEGPVEDTKPKPSR#LFMPNLVPPKIPDGERVDFDDIHRKRVEKD 111 |+ ||| +|| |+ |+||||++|||| +# |||||+|||||||||||||||||||+||| Sbjct 71 ESKVEEQEEEEEVKEVEDGPVEESKPKP-K#PFMPNLIPPKIPDGERVDFDDIHRKRMEKD 129 |
| Bos taurus | Query 59 GPDEEAKDAEEGPVEDTKPKPSR#LFMPNLVPPKIPDGERVDFDDIHRKRVEKD 111 | +|| ++||+||||+ |||| |# |||||||||||||||||||||||||+||| Sbjct 44 GEEEEGREAEDGPVEEFKPKP-R#PFMPNLVPPKIPDGERVDFDDIHRKRMEKD 95 |
| Xenopus laevis | Query 52 EANVEEVGPDEEAKDAEEGPVEDTKPKPSR#LFMPNLVPPKIPDGERVDFDDIHRKRVEKD 111 | || | +|| + || |++|||| +#||||||+| ||||||+||||||||||+||| Sbjct 24 EEEPEEDGNEEEVNEEEE---EESKPKP-K#LFMPNLIPLKIPDGEKVDFDDIHRKRMEKD 79 |
| Danio rerio | Query 52 EANVEEVGPDEEAKDAEEGPVEDTKPKPSR#LFMPNLVPPKIPDGERVDFDDIHRKRVEKD 111 | + | ||| | | ||||||| +#+|+||++|||+||||+|||||+|||||||| Sbjct 49 EGDEPEETHQEEADDEHEAE-EDTKPKP-K#MFVPNIIPPKLPDGEKVDFDDLHRKRVEKD 106 |
| Sus scrofa | Query 52 EANVEEVGPDEEAKDAEEGPVEDTKPKPSR#LFMPNLVPPKIPDGERVDFDDIHRKRVEKD 111 | || |+|| +| | |+ +|||||# +| |+|||||+|||||||||||||+||| Sbjct 6 EQEYEEEQPEEE--EAAEEEEEEERPKPSR#PVVPPLIPPKIPEGERVDFDDIHRKRMEKD 63 |
| synthetic construct | Query 52 EANVEEVGPDEEAKDAEEG------PV---EDTKPKPSR#LFMPNLVPPKIPDGERVDFDD 102 | || |+||| + || || |+ +|||||# +| |+|||||+|||||||| Sbjct 6 EQEYEEEQPEEEAAEEEEEAPEEPEPVAEPEEERPKPSR#PVVPPLIPPKIPEGERVDFDD 65 Query 103 IHRKRVEKD 111 |||||+||| Sbjct 66 IHRKRMEKD 74 |
| Meleagris gallopavo | Query 56 EEVGPDEEAK--DAEEGPVE-DTKPKPSR#LFMPNLVPPKIPDGERVDFDDIHRKRVEKD 111 | |+|| | |+ | | ++|||| +# |||||||||||||||+|||||||||+||| Sbjct 46 ETKAPEEEGGEGDREQEPGEGESKPKP-K#PFMPNLVPPKIPDGERLDFDDIHRKRMEKD 103 |
| Gallus gallus | Query 52 EANVEEVGPDEEAK-DAEEGPVE-DTKPKPSR#LFMPNLVPPKIPDGERVDFDDIHRKRVE 109 | | | | + | |+ | | ++|||| +# |||||||||||||||+|||||||||+| Sbjct 52 EQEDETKAPGEGGEGDREQEPGEGESKPKP-K#PFMPNLVPPKIPDGERLDFDDIHRKRME 110 Query 110 KD 111 || Query 110 KD 111 |
| Sparus aurata | Query 56 EEVGPDEEAKDAE----EGPVEDTKPKPSR#LFMPNLVPPKIPDGERVDFDDIHRKRVEKD 111 ||| +|| +| | | |++||+ # ++||+ |||+||||+|||||+|||||||| Sbjct 25 EEVEEEEEEQDNETEKKEEQEEESKPRHKT#TYVPNIAPPKLPDGEKVDFDDLHRKRVEKD 84 |
| Bufo marinus | Query 52 EANVEEVGPDEEAKDAEEGPVEDTKPKPSR#LFMPNLVPPKIPDGERVDFDDIHRKRVEKD 111 | || +|| + || |+ +|+| |# || | |||||+|||||||||||||+||| Sbjct 10 EEQQEEEEQEEEKEPTEEAGGEEERPRP-R#PMMPRLAPPKIPEGERVDFDDIHRKRMEKD 68 |
| Tetraodon nigroviridis | Query 66 DAEE--GPVEDTKPKPSR#LFMPNLVPPKIPDGERVDFDDIHRKRVEKD 111 |+|| | |+++|+| # ++||+ |||+||||+|||||+||||+||| Sbjct 3 DSEEIKGEHEESRPRPKA#TYVPNMAPPKLPDGEKVDFDDLHRKRLEKD 50 |
| Salmo trutta | Query 52 EANVEEVGPDEEAKDAE-EGPVEDTKPKPSR#LFMPNLVPPKIPDGE-RVDFDDIHRKRVE 109 | ++|| || | | +|+| || +# ||||+ |||+|+|+ +|||||+|||| | Sbjct 32 EPDIEEPTAVEETPAEEASGETQDSKAKP-K#SFMPNVAPPKLPEGDGKVDFDDLHRKRQE 90 Query 110 KD 111 || Query 110 KD 111 |
| Hyla chrysoscelis | Query 55 VEEVGPDEEAKDAEEGPVEDTKPKPSR#LFMPNLVPPKIPDGERVDFDDIHRKRVEKD 111 ||| +|||++ || + |||| # + |||||||+|||||| +|| || Sbjct 10 VEEEYEEEEAEEVEEHHEAEEKPKPK-#-----ITAPKIPDGEKVDFDDIQKKRQNKD 60 |
| Coturnix japonica | Query 52 EANVEEVGPDEEAKDAEEGPVEDTKPKPSR#LFMPNLVPPKIPDGERVDFDDIHRKRVEKD 111 | || +|| ++ || | |+ ||+ # | ||||+||+|||||| +|| || Sbjct 5 EHGEEEYEEEEEVQEEEEAPEEEEKPRIK-#-----LTAPKIPEGEKVDFDDIQKKRQNKD 58 |
| Xenopus tropicalis | Query 52 EANVEEVGPDEEAKDAEEGPVEDTKPKPSR#LF----------MPNLVPPKIPDGERVDFD 101 | || +||+++ || || + |+ # + | | ||||+||+|||| Sbjct 11 EEEYEEEAQEEESQEQEEEPVVEEAPQEEE#AYGEAEEEEEKPKPKLTAPKIPEGEKVDFD 70 Query 102 DIHRKRVEKD 111 || +|| || Sbjct 71 DIQKKRQNKD 80 |
| human, familial hypertrophic cardiomyopathy, family AW, Peptide Partial Mutant, 25 aa | Query 84 MPNLVPPKIPDGERVDFDDIHRKRV 108 |||||||| |||||||||||||||+ Sbjct 1 MPNLVPPKNPDGERVDFDDIHRKRM 25 |
| rabbits, skeletal muscle, Peptide, 249 aa | Query 54 NVEEVGPDEEAKDAEEGPVEDTKPKPSR#LFMPNLVPPKIPDGERVDFDDIHRKRVEKD 111 +||| +|| || |+ ||+| # | ||||+||+|||||| +|| || Sbjct 7 HVEEQYEEEEEAQEEEEVHEEEKPRPK-#-----LTAPKIPEGEKVDFDDIQKKRQNKD 58 |
| Halocynthia roretzi | Query 84 MPNLVPPKIPDGERVDFDDIHRKRVEK 110 |||+ |||||||| +| +||||||++| Sbjct 12 MPNITPPKIPDGEVIDLEDIHRKRMDK 38 |
* References
[PubMed ID: 10349636] Carninci P, Hayashizaki Y, High-efficiency full-length cDNA cloning. Methods Enzymol. 1999;303:19-44.
[PubMed ID: 11042159] ... Carninci P, Shibata Y, Hayatsu N, Sugahara Y, Shibata K, Itoh M, Konno H, Okazaki Y, Muramatsu M, Hayashizaki Y, Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes. Genome Res. 2000 Oct;10(10):1617-30.
[PubMed ID: 11076861] ... Shibata K, Itoh M, Aizawa K, Nagaoka S, Sasaki N, Carninci P, Konno H, Akiyama J, Nishi K, Kitsunai T, Tashiro H, Itoh M, Sumi N, Ishii Y, Nakamura S, Hazama M, Nishine T, Harada A, Yamamoto R, Matsumoto H, Sakaguchi S, Ikegami T, Kashiwagi K, Fujiwake S, Inoue K, Togawa Y, RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Genome Res. 2000 Nov;10(11):1757-71.
[PubMed ID: 11217851] ... Kawai J, Shinagawa A, Shibata K, Yoshino M, Itoh M, Ishii Y, Arakawa T, Hara A, Fukunishi Y, Konno H, Adachi J, Fukuda S, Aizawa K, Izawa M, Nishi K, Kiyosawa H, Kondo S, Yamanaka I, Saito T, Okazaki Y, Gojobori T, Bono H, Kasukawa T, Saito R, Kadota K, Matsuda H, Ashburner M, Batalov S, Casavant T, Fleischmann W, Gaasterland T, Gissi C, King B, Kochiwa H, Kuehl P, Lewis S, Matsuo Y, Nikaido I, Pesole G, Quackenbush J, Schriml LM, Staubli F, Suzuki R, Tomita M, Wagner L, Washio T, Sakai K, Okido T, Furuno M, Aono H, Baldarelli R, Barsh G, Blake J, Boffelli D, Bojunga N, Carninci P, de Bonaldo MF, Brownstein MJ, Bult C, Fletcher C, Fujita M, Gariboldi M, Gustincich S, Hill D, Hofmann M, Hume DA, Kamiya M, Lee NH, Lyons P, Marchionni L, Mashima J, Mazzarelli J, Mombaerts P, Nordone P, Ring B, Ringwald M, Rodriguez I, Sakamoto N, Sasaki H, Sato K, Schonbach C, Seya T, Shibata Y, Storch KF, Suzuki H, Toyo-oka K, Wang KH, Weitz C, Whittaker C, Wilming L, Wynshaw-Boris A, Yoshida K, Hasegawa Y, Kawaji H, Kohtsuki S, Hayashizaki Y, Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90.
[PubMed ID: 12466851] ... Okazaki Y, Furuno M, Kasukawa T, Adachi J, Bono H, Kondo S, Nikaido I, Osato N, Saito R, Suzuki H, Yamanaka I, Kiyosawa H, Yagi K, Tomaru Y, Hasegawa Y, Nogami A, Schonbach C, Gojobori T, Baldarelli R, Hill DP, Bult C, Hume DA, Quackenbush J, Schriml LM, Kanapin A, Matsuda H, Batalov S, Beisel KW, Blake JA, Bradt D, Brusic V, Chothia C, Corbani LE, Cousins S, Dalla E, Dragani TA, Fletcher CF, Forrest A, Frazer KS, Gaasterland T, Gariboldi M, Gissi C, Godzik A, Gough J, Grimmond S, Gustincich S, Hirokawa N, Jackson IJ, Jarvis ED, Kanai A, Kawaji H, Kawasawa Y, Kedzierski RM, King BL, Konagaya A, Kurochkin IV, Lee Y, Lenhard B, Lyons PA, Maglott DR, Maltais L, Marchionni L, McKenzie L, Miki H, Nagashima T, Numata K, Okido T, Pavan WJ, Pertea G, Pesole G, Petrovsky N, Pillai R, Pontius JU, Qi D, Ramachandran S, Ravasi T, Reed JC, Reed DJ, Reid J, Ring BZ, Ringwald M, Sandelin A, Schneider C, Semple CA, Setou M, Shimada K, Sultana R, Takenaka Y, Taylor MS, Teasdale RD, Tomita M, Verardo R, Wagner L, Wahlestedt C, Wang Y, Watanabe Y, Wells C, Wilming LG, Wynshaw-Boris A, Yanagisawa M, Yang I, Yang L, Yuan Z, Zavolan M, Zhu Y, Zimmer A, Carninci P, Hayatsu N, Hirozane-Kishikawa T, Konno H, Nakamura M, Sakazume N, Sato K, Shiraki T, Waki K, Kawai J, Aizawa K, Arakawa T, Fukuda S, Hara A, Hashizume W, Imotani K, Ishii Y, Itoh M, Kagawa I, Miyazaki A, Sakai K, Sasaki D, Shibata K, Shinagawa A, Yasunishi A, Yoshino M, Waterston R, Lander ES, Rogers J, Birney E, Hayashizaki Y, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002 Dec 5;420(6915):563-73.
[PubMed ID: 16141072] ... Carninci P, Kasukawa T, Katayama S, Gough J, Frith MC, Maeda N, Oyama R, Ravasi T, Lenhard B, Wells C, Kodzius R, Shimokawa K, Bajic VB, Brenner SE, Batalov S, Forrest AR, Zavolan M, Davis MJ, Wilming LG, Aidinis V, Allen JE, Ambesi-Impiombato A, Apweiler R, Aturaliya RN, Bailey TL, Bansal M, Baxter L, Beisel KW, Bersano T, Bono H, Chalk AM, Chiu KP, Choudhary V, Christoffels A, Clutterbuck DR, Crowe ML, Dalla E, Dalrymple BP, de Bono B, Della Gatta G, di Bernardo D, Down T, Engstrom P, Fagiolini M, Faulkner G, Fletcher CF, Fukushima T, Furuno M, Futaki S, Gariboldi M, Georgii-Hemming P, Gingeras TR, Gojobori T, Green RE, Gustincich S, Harbers M, Hayashi Y, Hensch TK, Hirokawa N, Hill D, Huminiecki L, Iacono M, Ikeo K, Iwama A, Ishikawa T, Jakt M, Kanapin A, Katoh M, Kawasawa Y, Kelso J, Kitamura H, Kitano H, Kollias G, Krishnan SP, Kruger A, Kummerfeld SK, Kurochkin IV, Lareau LF, Lazarevic D, Lipovich L, Liu J, Liuni S, McWilliam S, Madan Babu M, Madera M, Marchionni L, Matsuda H, Matsuzawa S, Miki H, Mignone F, Miyake S, Morris K, Mottagui-Tabar S, Mulder N, Nakano N, Nakauchi H, Ng P, Nilsson R, Nishiguchi S, Nishikawa S, Nori F, Ohara O, Okazaki Y, Orlando V, Pang KC, Pavan WJ, Pavesi G, Pesole G, Petrovsky N, Piazza S, Reed J, Reid JF, Ring BZ, Ringwald M, Rost B, Ruan Y, Salzberg SL, Sandelin A, Schneider C, Schonbach C, Sekiguchi K, Semple CA, Seno S, Sessa L, Sheng Y, Shibata Y, Shimada H, Shimada K, Silva D, Sinclair B, Sperling S, Stupka E, Sugiura K, Sultana R, Takenaka Y, Taki K, Tammoja K, Tan SL, Tang S, Taylor MS, Tegner J, Teichmann SA, Ueda HR, van Nimwegen E, Verardo R, Wei CL, Yagi K, Yamanishi H, Zabarovsky E, Zhu S, Zimmer A, Hide W, Bult C, Grimmond SM, Teasdale RD, Liu ET, Brusic V, Quackenbush J, Wahlestedt C, Mattick JS, Hume DA, Kai C, Sasaki D, Tomaru Y, Fukuda S, Kanamori-Katayama M, Suzuki M, Aoki J, Arakawa T, Iida J, Imamura K, Itoh M, Kato T, Kawaji H, Kawagashira N, Kawashima T, Kojima M, Kondo S, Konno H, Nakano K, Ninomiya N, Nishio T, Okada M, Plessy C, Shibata K, Shiraki T, Suzuki S, Tagami M, Waki K, Watahiki A, Okamura-Oho Y, Suzuki H, Kawai J, Hayashizaki Y, The transcriptional landscape of the mammalian genome. Science. 2005 Sep 2;309(5740):1559-63.
[PubMed ID: 16141073] ... Katayama S, Tomaru Y, Kasukawa T, Waki K, Nakanishi M, Nakamura M, Nishida H, Yap CC, Suzuki M, Kawai J, Suzuki H, Carninci P, Hayashizaki Y, Wells C, Frith M, Ravasi T, Pang KC, Hallinan J, Mattick J, Hume DA, Lipovich L, Batalov S, Engstrom PG, Mizuno Y, Faghihi MA, Sandelin A, Chalk AM, Mottagui-Tabar S, Liang Z, Lenhard B, Wahlestedt C, Antisense transcription in the mammalian transcriptome. Science. 2005 Sep 2;309(5740):1564-6.