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XSB2273 : Calpain 3 [Mus musculus]

[ CaMP Format ]

This entry is computationally expanded from SB0104

* Basic Information

OrganismMus musculus (house mouse)
Protein Namescalpain 3
Gene NamesCapn3
Gene LocusNot available
GO FunctionNot available
Entrez Protein Entrez Nucleotide Entrez Gene UniProt OMIM HGNC HPRD KEGG
AAI39791 N/A 12335 A4QPE6_MOUSE N/A N/A N/A mmu:12335

* Information From OMIM

Not Available.

* Structure Information

1. Primary Information

Length: 821 aa

Average Mass: 94.227 kDa

Monoisotopic Mass: 94.168 kDa

2. Domain Information

Annotated Domains: interpro / pfam / smart / prosite

Computationally Assigned Domains (Pfam+HMMER):

domain namebeginendscoree-value
Peptidase_C2 1. 74417933.69.3e-278
--- cleavage 342 (inside Peptidase_C2 74..417) ---
--- cleavage 364 (inside Peptidase_C2 74..417) ---
--- cleavage 390 (inside Peptidase_C2 74..417) ---
Calpain_III 1. 428582370.82.5e-108
efhand 1. 6536800.618
efhand 2. 69672428.52.6e-05
efhand 3. 72675427.45.8e-05
efhand 4. 7918189.91.8

3. Sequence Information

Fasta Sequence: XSB2273.fasta

Amino Acid Sequence and Secondary Structures (PsiPred):

4. 3D Information

Not Available.

* Cleavage Information

3 [sites]

Cleavage sites (±10aa)

[Site 1] GHAYSVTGLE342-EALFKGEKVK

Glu342 Glu

P10 P9 P8 P7 P6 P5 P4 P3 P2 P1
Gly333His334Ala335Tyr336Ser337Val338Thr339Gly340Leu341Glu342
P1' P2' P3' P4' P5' P6' P7' P8' P9' P10'
Glu343Ala344Leu345Phe346Lys347Gly348Glu349Lys350Val351Lys352

Sequence conservation (by blast)

[Site 2] RLRNPWGQVE364-WNGSWSDGWK

Glu364 Trp

P10 P9 P8 P7 P6 P5 P4 P3 P2 P1
Arg355Leu356Arg357Asn358Pro359Trp360Gly361Gln362Val363Glu364
P1' P2' P3' P4' P5' P6' P7' P8' P9' P10'
Trp365Asn366Gly367Ser368Trp369Ser370Asp371Gly372Trp373Lys374

Sequence conservation (by blast)

[Site 3] KDEKARLQHQ390-VTEDGEFWMS

Gln390 Val

P10 P9 P8 P7 P6 P5 P4 P3 P2 P1
Lys381Asp382Glu383Lys384Ala385Arg386Leu387Gln388His389Gln390
P1' P2' P3' P4' P5' P6' P7' P8' P9' P10'
Val391Thr392Glu393Asp394Gly395Glu396Phe397Trp398Met399Ser400

Sequence conservation (by blast)

* References

[PubMed ID: 12477932] Strausberg RL, Feingold EA, Grouse LH, Derge JG, Klausner RD, Collins FS, Wagner L, Shenmen CM, Schuler GD, Altschul SF, Zeeberg B, Buetow KH, Schaefer CF, Bhat NK, Hopkins RF, Jordan H, Moore T, Max SI, Wang J, Hsieh F, Diatchenko L, Marusina K, Farmer AA, Rubin GM, Hong L, Stapleton M, Soares MB, Bonaldo MF, Casavant TL, Scheetz TE, Brownstein MJ, Usdin TB, Toshiyuki S, Carninci P, Prange C, Raha SS, Loquellano NA, Peters GJ, Abramson RD, Mullahy SJ, Bosak SA, McEwan PJ, McKernan KJ, Malek JA, Gunaratne PH, Richards S, Worley KC, Hale S, Garcia AM, Gay LJ, Hulyk SW, Villalon DK, Muzny DM, Sodergren EJ, Lu X, Gibbs RA, Fahey J, Helton E, Ketteman M, Madan A, Rodrigues S, Sanchez A, Whiting M, Madan A, Young AC, Shevchenko Y, Bouffard GG, Blakesley RW, Touchman JW, Green ED, Dickson MC, Rodriguez AC, Grimwood J, Schmutz J, Myers RM, Butterfield YS, Krzywinski MI, Skalska U, Smailus DE, Schnerch A, Schein JE, Jones SJ, Marra MA, Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.