logo CaMPDB: Calpain for Modulatory Proteolysis Database

XSB2374 : PREDICTED: similar to integrin beta-1 subunit isoform 2 [Ornithorhynchus anatinus]

[ CaMP Format ]

This entry is computationally expanded from SB0079

* Basic Information

OrganismOrnithorhynchus anatinus (platypus)
Protein Namessimilar to integrin beta-1 subunit isoform 2
Gene NamesLOC100073959; Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 27 Proteins
Gene LocusNot available
GO FunctionNot available
Entrez Protein Entrez Nucleotide Entrez Gene UniProt OMIM HGNC HPRD KEGG
XP_001508202 XM_001508152 100073959 N/A N/A N/A N/A N/A

* Information From OMIM

Not Available.

* Structure Information

1. Primary Information

Length: 802 aa

Average Mass: 88.443 kDa

Monoisotopic Mass: 88.385 kDa

2. Domain Information

Annotated Domains: Not Available.

Computationally Assigned Domains (Pfam+HMMER):

domain namebeginendscoree-value
Integrin_beta 1. 344651123.60
EGF_2 1. 46750112.00.13
EGF_2 2. 51755421.50.0036
EGF_2 3. 56159121.40.0038
EGF_2 4. 60063136.01.5e-07
Integrin_B_tail 1. 641729156.86.3e-44
Integrin_b_cyt 1. 75379796.59.4e-26
--- cleavage 796 (inside Integrin_b_cyt 753..797) ---
--- cleavage 789 (inside Integrin_b_cyt 753..797) ---
--- cleavage 790 (inside Integrin_b_cyt 753..797) ---
--- cleavage 791 (inside Integrin_b_cyt 753..797) ---
--- cleavage 792 (inside Integrin_b_cyt 753..797) ---
--- cleavage 784 (inside Integrin_b_cyt 753..797) ---
--- cleavage 778 (inside Integrin_b_cyt 753..797) ---
--- cleavage 779 (inside Integrin_b_cyt 753..797) ---

3. Sequence Information

Fasta Sequence: XSB2374.fasta

Amino Acid Sequence and Secondary Structures (PsiPred):

4. 3D Information

Not Available.

* Cleavage Information

8 [sites]

Cleavage sites (±10aa)

[Site 1] PINKFKNPNY796-GRKAGL

Tyr796 Gly

P10 P9 P8 P7 P6 P5 P4 P3 P2 P1
Pro787Ile788Asn789Lys790Phe791Lys792Asn793Pro794Asn795Tyr796
P1' P2' P3' P4' P5' P6' P7' P8' P9' P10'
Gly797Arg798Lys799Ala800Gly801Leu802----

Sequence conservation (by blast)

[Site 2] ENPIYKSPIN789-KFKNPNYGRK

Asn789 Lys

P10 P9 P8 P7 P6 P5 P4 P3 P2 P1
Glu780Asn781Pro782Ile783Tyr784Lys785Ser786Pro787Ile788Asn789
P1' P2' P3' P4' P5' P6' P7' P8' P9' P10'
Lys790Phe791Lys792Asn793Pro794Asn795Tyr796Gly797Arg798Lys799

Sequence conservation (by blast)

[Site 3] NPIYKSPINK790-FKNPNYGRKA

Lys790 Phe

P10 P9 P8 P7 P6 P5 P4 P3 P2 P1
Asn781Pro782Ile783Tyr784Lys785Ser786Pro787Ile788Asn789Lys790
P1' P2' P3' P4' P5' P6' P7' P8' P9' P10'
Phe791Lys792Asn793Pro794Asn795Tyr796Gly797Arg798Lys799Ala800

Sequence conservation (by blast)

[Site 4] PIYKSPINKF791-KNPNYGRKAG

Phe791 Lys

P10 P9 P8 P7 P6 P5 P4 P3 P2 P1
Pro782Ile783Tyr784Lys785Ser786Pro787Ile788Asn789Lys790Phe791
P1' P2' P3' P4' P5' P6' P7' P8' P9' P10'
Lys792Asn793Pro794Asn795Tyr796Gly797Arg798Lys799Ala800Gly801

Sequence conservation (by blast)

[Site 5] IYKSPINKFK792-NPNYGRKAGL

Lys792 Asn

P10 P9 P8 P7 P6 P5 P4 P3 P2 P1
Ile783Tyr784Lys785Ser786Pro787Ile788Asn789Lys790Phe791Lys792
P1' P2' P3' P4' P5' P6' P7' P8' P9' P10'
Asn793Pro794Asn795Tyr796Gly797Arg798Lys799Ala800Gly801Leu802

Sequence conservation (by blast)

[Site 6] KWDTQENPIY784-KSPINKFKNP

Tyr784 Lys

P10 P9 P8 P7 P6 P5 P4 P3 P2 P1
Lys775Trp776Asp777Thr778Gln779Glu780Asn781Pro782Ile783Tyr784
P1' P2' P3' P4' P5' P6' P7' P8' P9' P10'
Lys785Ser786Pro787Ile788Asn789Lys790Phe791Lys792Asn793Pro794

Sequence conservation (by blast)

[Site 7] KEKMNAKWDT778-QENPIYKSPI

Thr778 Gln

P10 P9 P8 P7 P6 P5 P4 P3 P2 P1
Lys769Glu770Lys771Met772Asn773Ala774Lys775Trp776Asp777Thr778
P1' P2' P3' P4' P5' P6' P7' P8' P9' P10'
Gln779Glu780Asn781Pro782Ile783Tyr784Lys785Ser786Pro787Ile788

Sequence conservation (by blast)

[Site 8] EKMNAKWDTQ779-ENPIYKSPIN

Gln779 Glu

P10 P9 P8 P7 P6 P5 P4 P3 P2 P1
Glu770Lys771Met772Asn773Ala774Lys775Trp776Asp777Thr778Gln779
P1' P2' P3' P4' P5' P6' P7' P8' P9' P10'
Glu780Asn781Pro782Ile783Tyr784Lys785Ser786Pro787Ile788Asn789

Sequence conservation (by blast)

* References

None.