XSB2634 : glutamate [NMDA] receptor subunit epsilon 1 precursor [synthetic construct]
[ CaMP Format ]
This entry is computationally expanded from SB0072
* Basic Information
| Organism | synthetic construct |
| Protein Names | glutamate [NMDA] receptor subunit epsilon 1 precursor |
| Gene Names | GRIN2A |
| Gene Locus | Not available |
| GO Function | Not available |
| Entrez Protein | Entrez Nucleotide | Entrez Gene | UniProt | OMIM | HGNC | HPRD | KEGG |
|---|---|---|---|---|---|---|---|
| BAG10859 | N/A | N/A | N/A | N/A | N/A | N/A | N/A |
* Information From OMIM
Not Available.
* Structure Information
1. Primary Information
Length: 1464 aa
Average Mass: 165.317 kDa
Monoisotopic Mass: 165.211 kDa
2. Domain Information
Annotated Domains: Not Available.
Computationally Assigned Domains (Pfam+HMMER):
| domain name | begin | end | score | e-value |
|---|---|---|---|---|
| HS1_rep 1. | 179 | 215 | 7.0 | 2.9 |
| Lig_chan-Glu_bd 1. | 439 | 502 | 80.6 | 5.5e-21 |
| Lig_chan 1. | 554 | 838 | 376.4 | 4.9e-110 |
| NMDAR2_C 1. | 839 | 1464 | 1213.1 | 0 |
| --- cleavage 1329 (inside NMDAR2_C 839..1464) --- | ||||
3. Sequence Information
Fasta Sequence: XSB2634.fasta
Amino Acid Sequence and Secondary Structures (PsiPred):
4. 3D Information
Not Available.
* Cleavage Information
1 [sites]
Cleavage sites (±10aa)
[Site 1] LEGNFYGSLF1329-SVPSSKLSGK
Phe1329 
Ser
 |
|||||||||
| P10 | P9 | P8 | P7 | P6 | P5 | P4 | P3 | P2 | P1 |
|---|---|---|---|---|---|---|---|---|---|
| Leu1320 | Glu1321 | Gly1322 | Asn1323 | Phe1324 | Tyr1325 | Gly1326 | Ser1327 | Leu1328 | Phe1329 |
 |
|||||||||
| P1' | P2' | P3' | P4' | P5' | P6' | P7' | P8' | P9' | P10' |
| Ser1330 | Val1331 | Pro1332 | Ser1333 | Ser1334 | Lys1335 | Leu1336 | Ser1337 | Gly1338 | Lys1339 |
Sequence conservation (by blast)
* References
[PubMed ID: 18316326] Nagase T, Yamakawa H, Tadokoro S, Nakajima D, Inoue S, Yamaguchi K, Itokawa Y, Kikuno RF, Koga H, Ohara O, Exploration of human ORFeome: high-throughput preparation of ORF clones and efficient characterization of their protein products. DNA Res. 2008 Jun 30;15(3):137-49. Epub 2008 Mar 2.