logo CaMPDB: Calpain for Modulatory Proteolysis Database

XSB2695 : similar to actin alpha [Xenopus laevis]

[ CaMP Format ]

This entry is computationally expanded from SB0071

* Basic Information

OrganismXenopus laevis (African clawed frog)
Protein NamesMGC53823 protein; similar to actin alpha
Gene NamesMGC53823; similar to actin alpha
Gene LocusNot available
GO FunctionNot available
Entrez Protein Entrez Nucleotide Entrez Gene UniProt OMIM HGNC HPRD KEGG
NP_001079664 NM_001086195 379351 Q7ZWR7_XENLA N/A N/A N/A xla:379351

* Information From OMIM

Not Available.

* Structure Information

1. Primary Information

Length: 377 aa

Average Mass: 42.019 kDa

Monoisotopic Mass: 41.992 kDa

2. Domain Information

Annotated Domains: interpro / pfam / smart / prosite

Computationally Assigned Domains (Pfam+HMMER):

domain namebeginendscoree-value
Actin 1. 4377841.16.5e-250
--- cleavage 39 (inside Actin 4..377) ---

3. Sequence Information

Fasta Sequence: XSB2695.fasta

Amino Acid Sequence and Secondary Structures (PsiPred):

4. 3D Information

Not Available.

* Cleavage Information

1 [sites]

Cleavage sites (±10aa)

[Site 1] RAVFPSIVGR39-PRHQGVMVGM

Arg39 Pro

P10 P9 P8 P7 P6 P5 P4 P3 P2 P1
Arg30Ala31Val32Phe33Pro34Ser35Ile36Val37Gly38Arg39
P1' P2' P3' P4' P5' P6' P7' P8' P9' P10'
Pro40Arg41His42Gln43Gly44Val45Met46Val47Gly48Met49

Sequence conservation (by blast)

* References

[PubMed ID: 12454917] Klein SL, Strausberg RL, Wagner L, Pontius J, Clifton SW, Richardson P, Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Dev Dyn. 2002 Dec;225(4):384-91.