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XSB2698 : similar to actin, alpha 1, skeletal muscle [Xenopus laevis]

[ CaMP Format ]

This entry is computationally expanded from SB0071

* Basic Information

OrganismXenopus laevis (African clawed frog)
Protein NamesActin, alpha sarcomeric/skeletal; Actin alpha 3; similar to actin; alpha 1; skeletal muscle
Gene NamesMGC52643; similar to actin, alpha 1, skeletal muscle
Gene LocusNot available
GO FunctionNot available
Entrez Protein Entrez Nucleotide Entrez Gene UniProt OMIM HGNC HPRD KEGG
NP_001082366 NM_001088897 398426 ACT3_XENLA N/A N/A N/A xla:779096

* Information From OMIM

Not Available.

* Structure Information

1. Primary Information

Length: 377 aa

Average Mass: 41.984 kDa

Monoisotopic Mass: 41.957 kDa

2. Domain Information

Annotated Domains: interpro / pfam / smart / prosite

Computationally Assigned Domains (Pfam+HMMER):

domain namebeginendscoree-value
Actin 1. 4377835.63e-248
--- cleavage 39 (inside Actin 4..377) ---

3. Sequence Information

Fasta Sequence: XSB2698.fasta

Amino Acid Sequence and Secondary Structures (PsiPred):

4. 3D Information

Not Available.

* Cleavage Information

1 [sites]

Cleavage sites (±10aa)

[Site 1] RAVFPSIVGR39-PRHQGVMVGM

Arg39 Pro

P10 P9 P8 P7 P6 P5 P4 P3 P2 P1
Arg30Ala31Val32Phe33Pro34Ser35Ile36Val37Gly38Arg39
P1' P2' P3' P4' P5' P6' P7' P8' P9' P10'
Pro40Arg41His42Gln43Gly44Val45Met46Val47Gly48Met49

Sequence conservation (by blast)

* References

[PubMed ID: 12454917] Klein SL, Strausberg RL, Wagner L, Pontius J, Clifton SW, Richardson P, Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Dev Dyn. 2002 Dec;225(4):384-91.

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