XSB2922 : PREDICTED: similar to dystrophin, partial [Bos taurus]
[ CaMP Format ]
This entry is computationally expanded from SB0073
* Basic Information
| Organism | Bos taurus (cattle) |
| Protein Names | similar to dystrophin |
| Gene Names | LOC537655; Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST |
| Gene Locus | Not available |
| GO Function | Not available |
* Information From OMIM
Not Available.
* Structure Information
1. Primary Information
Length: 805 aa
Average Mass: 93.798 kDa
Monoisotopic Mass: 93.740 kDa
2. Domain Information
Annotated Domains: Not Available.
Computationally Assigned Domains (Pfam+HMMER):
| domain name | begin | end | score | e-value |
| --- cleavage 86 --- |
| Complex1_LYR 1. | 166 | 230 | -13.9 | 5.6 |
| Spectrin 1. | 256 | 360 | 40.4 | 7.3e-09 |
| Spectrin 2. | 365 | 471 | 33.5 | 8.5e-07 |
| Spectrin 3. | 474 | 580 | 86.2 | 1.1e-22 |
| Spectrin 4. | 583 | 689 | 55.0 | 3e-13 |
3. Sequence Information
Fasta Sequence: XSB2922.fasta
Amino Acid Sequence and Secondary Structures (PsiPred):
4. 3D Information
Not Available.
* Cleavage Information
1 [sites]
Cleavage sites (±10aa)
[Site 1] VMETVTMVTT86-REQILVKHAQ
Thr86 
Arg
 |
| P10 | P9 | P8 | P7 | P6 |
P5 | P4 | P3 | P2 | P1 |
| Val77 | Met78 | Glu79 | Thr80 | Val81 | Thr82 | Met83 | Val84 | Thr85 | Thr86 |
 |
| P1' | P2' | P3' | P4' | P5' |
P6' | P7' | P8' | P9' | P10' |
| Arg87 | Glu88 | Gln89 | Ile90 | Leu91 | Val92 | Lys93 | His94 | Ala95 | Gln96 |
Sequence conservation (by blast)
Sequence conservation (by blast)
| Reference peptide (cleaved bond±30 residues) |
|---|
|
SSTQISQAVTTTQPSLTQTTVMETVTMVTTREQILVKHAQEELPPPPPQKKRQIIVDSEI
|
Summary
| # |
organism |
max score |
hits |
top seq |
| 1 |
Sus scrofa |
48.50 |
1 |
dystrophin |
| 2 |
Bos taurus |
48.50 |
1 |
PREDICTED: similar to dystrophin, partial |
| 3 |
Canis familiaris |
46.60 |
1 |
PREDICTED: hypothetical protein XP_850502 |
| 4 |
Canis lupus familiaris |
46.60 |
1 |
dystrophin |
| 5 |
Homo sapiens |
43.50 |
15 |
dystrophin (muscular dystrophy, Duchenne and Becke |
| 6 |
N/A |
43.50 |
3 |
D |
| 7 |
Macaca mulatta |
43.50 |
1 |
PREDICTED: dystrophin, partial |
| 8 |
Mus musculus |
43.10 |
1 |
dystrophin, muscular dystrophy |
| 9 |
Monodelphis domestica |
42.00 |
1 |
PREDICTED: similar to T cell antigen receptor alph |
| 10 |
Gallus gallus |
39.30 |
1 |
dystrophin |
| 11 |
Danio rerio |
32.70 |
1 |
PREDICTED: dystrophin |
Top-ranked sequences
| organism | matching |
|---|
| Sus scrofa |
Query 57 SSTQISQAVXXXXXXXXXXXXXXXXXXXXX#XXXILVKHAQEELXXXXXQKKRQIIVDSEI 116
||||||||| # |||||||||| ||||||||||||
Sbjct 657 SSTQISQAVTTTQPSLTQTTVMETVTMVTT#REQILVKHAQEELPPPPPQKKRQIIVDSEI 716
|
| Bos taurus |
Query 57 SSTQISQAVXXXXXXXXXXXXXXXXXXXXX#XXXILVKHAQEELXXXXXQKKRQIIVDSEI 116
||||||||| # |||||||||| ||||||||||||
Sbjct 57 SSTQISQAVTTTQPSLTQTTVMETVTMVTT#REQILVKHAQEELPPPPPQKKRQIIVDSEI 116
|
| Canis familiaris |
Query 57 SSTQISQAVXXXXXXXXXXXXXXXXXXXXX#XXXILVKHAQEELXXXXXQKKRQIIVDSEI 116
|| |||||| # |||||||||| ||||||||||||
Sbjct 539 SSAQISQAVTTTQPSLTQTTVMETVTMVTT#REHILVKHAQEELPPPPPQKKRQIIVDSEI 598
|
| Canis lupus familiaris |
Query 57 SSTQISQAVXXXXXXXXXXXXXXXXXXXXX#XXXILVKHAQEELXXXXXQKKRQIIVDSEI 116
|| |||||| # |||||||||| ||||||||||||
Sbjct 662 SSAQISQAVTTTQPSLTQTTVMETVTMVTT#REHILVKHAQEELPPPPPQKKRQIIVDSEI 721
|
| Homo sapiens |
Query 57 SSTQISQAVXXXXXXXXXXXXXXXXXXXXX#XXXILVKHAQEELXXXXXQKKRQIIVDSEI 116
|+ |||||| # |||||||||| |||||| |||||
Sbjct 653 STAQISQAVTTTQPSLTQTTVMETVTTVTT#REQILVKHAQEELPPPPPQKKRQITVDSEI 712
|
| N/A |
Query 57 SSTQISQAVXXXXXXXXXXXXXXXXXXXXX#XXXILVKHAQEELXXXXXQKKRQIIVDSEI 116
|+ |||||| # |||||||||| |||||| |||||
Sbjct 661 STAQISQAVTTTQPSLTQTTVMETVTTVTT#REQILVKHAQEELPPPPPQKKRQITVDSEI 720
|
| Macaca mulatta |
Query 57 SSTQISQAVXXXXXXXXXXXXXXXXXXXXX#XXXILVKHAQEELXXXXXQKKRQIIVDSEI 116
|+ |||||| # |||||||||| |||||| |||||
Sbjct 363 STAQISQAVTTTQPSLTQTTVMETVTMVTT#REQILVKHAQEELPPPPPQKKRQITVDSEI 422
|
| Mus musculus |
Query 57 SSTQISQAVXXXXXXXXXXXXXXXXXXXXX#XXXILVKHAQEELXXXXXQKKRQIIVDSEI 116
|| |||||| # |+|||||||| |||||| ||||+
Sbjct 663 SSAQISQAVTTTQPSLTQTTVMETVTMVTT#REQIMVKHAQEELPPPPPQKKRQITVDSEL 722
|
| Monodelphis domestica |
Query 57 SSTQISQAVXXXXXXXXXXXXXXXXXXXXX#XXXILVKHAQEELXXXXXQKKRQIIVDSEI 116
|| |||||| # ||||||+|| ||||||+|||||
Sbjct 656 SSVQISQAVTTTQTSLTQTTVMETVTMVTT#REQILVKHAKEEPLPPPPQKKRQIVVDSEI 715
|
| Gallus gallus |
Query 58 STQISQAVXXXXXXXXXXXXXXXXXXXXX#XXXILVKHAQEELXXXXXQKKRQIIVDSEI 116
| |+|||| # ||||||+||| ||||++|||||
Sbjct 664 SKQVSQAVTTTQTSLTQTTVMETVTMVTT#REQILVKHAKEELPPPPPHKKRQLLVDSEI 722
|
| Danio rerio |
Query 91 LVKHAQEELXXXXXQKKRQIIVDSEI 116
+||| +| + ||||||+||||+
Sbjct 715 MVKHTKEGMSTPPPQKKRQIVVDSEL 740
|
