XSB2934 : rCG55135, isoform CRA_a [Rattus norvegicus]
[ CaMP Format ]
This entry is computationally expanded from SB0081
* Basic Information
| Organism | Rattus norvegicus (Norway rat) |
| Protein Names | rCG55135; isoform CRA_a |
| Gene Names | Not available |
| Gene Locus | Not available |
| GO Function | Not available |
| Entrez Protein | Entrez Nucleotide | Entrez Gene | UniProt | OMIM | HGNC | HPRD | KEGG |
|---|---|---|---|---|---|---|---|
| EDL98751 | N/A | N/A | N/A | N/A | N/A | N/A | N/A |
* Information From OMIM
Not Available.
* Structure Information
1. Primary Information
Length: 2577 aa
Average Mass: 273.684 kDa
Monoisotopic Mass: 273.513 kDa
2. Domain Information
Annotated Domains: Not Available.
Computationally Assigned Domains (Pfam+HMMER):
| domain name | begin | end | score | e-value |
|---|---|---|---|---|
| FERM_N 1. | 126 | 235 | 101.2 | 3.5e-27 |
| FERM_M 1. | 237 | 349 | 144.7 | 2.8e-40 |
| --- cleavage 469 --- | ||||
| Talin_middle 1. | 527 | 688 | 365.9 | 7.4e-107 |
| Stork_head 1. | 764 | 831 | -14.0 | 3.2 |
| Inhibitor_I34 1. | 876 | 941 | -11.3 | 7.9 |
| CRA_rpt 1. | 943 | 981 | -6.0 | 8.2 |
| CMD 1. | 1013 | 1095 | -15.1 | 8.7 |
| DUF1707 1. | 1191 | 1240 | -24.3 | 3.6 |
| XhlA 1. | 1396 | 1447 | -17.3 | 6.8 |
| Ins_element1 1. | 1512 | 1583 | -42.3 | 2.4 |
| WSK 1. | 1671 | 1700 | 0.9 | 8 |
| HHH 1. | 1841 | 1870 | 0.1 | 6.9 |
| VBS 1. | 1885 | 2009 | 288.8 | 1.2e-83 |
| Vir_act_alpha_C 1. | 2220 | 2298 | -18.9 | 1.2 |
| Wos2 1. | 2313 | 2358 | -3.6 | 3.1 |
| I_LWEQ 1. | 2377 | 2569 | 372.5 | 7.7e-109 |
3. Sequence Information
Fasta Sequence: XSB2934.fasta
Amino Acid Sequence and Secondary Structures (PsiPred):
4. 3D Information
Not Available.
* Cleavage Information
1 [sites]
Cleavage sites (±10aa)
[Site 1] VSPKKSTVLQ469-QQYNRVGKAE
Gln469 
Gln
 |
|||||||||
| P10 | P9 | P8 | P7 | P6 | P5 | P4 | P3 | P2 | P1 |
|---|---|---|---|---|---|---|---|---|---|
| Val460 | Ser461 | Pro462 | Lys463 | Lys464 | Ser465 | Thr466 | Val467 | Leu468 | Gln469 |
 |
|||||||||
| P1' | P2' | P3' | P4' | P5' | P6' | P7' | P8' | P9' | P10' |
| Gln470 | Gln471 | Tyr472 | Asn473 | Arg474 | Val475 | Gly476 | Lys477 | Ala478 | Glu479 |
Sequence conservation (by blast)
* References
[PubMed ID: 15632090] Florea L, Di Francesco V, Miller J, Turner R, Yao A, Harris M, Walenz B, Mobarry C, Merkulov GV, Charlab R, Dew I, Deng Z, Istrail S, Li P, Sutton G, Gene and alternative splicing annotation with AIR. Genome Res. 2005 Jan;15(1):54-66.