XSB2969 : ATPase, Ca++ transporting, plasma membrane 1, isoform CRA_b [Rattus norvegicus]
[ CaMP Format ]
This entry is computationally expanded from SB0056
* Basic Information
| Organism | Rattus norvegicus (Norway rat) |
| Protein Names | ATPase; Ca++ transporting; plasma membrane 1; isoform CRA_b |
| Gene Names | Atp2b1 |
| Gene Locus | Not available |
| GO Function | Not available |
* Information From OMIM
Not Available.
* Structure Information
1. Primary Information
Length: 1220 aa
Average Mass: 134.717 kDa
Monoisotopic Mass: 134.632 kDa
2. Domain Information
Annotated Domains: Not Available.
Computationally Assigned Domains (Pfam+HMMER):
| domain name | begin | end | score | e-value |
|---|---|---|---|---|
| efhand 1. | 13 | 41 | 3.9 | 7.8 |
| Cation_ATPase_N 1. | 44 | 127 | 84.9 | 2.8e-22 |
| E1-E2_ATPase 1. | 158 | 465 | 231.8 | 1.7e-66 |
| Hydrolase 1. | 469 | 818 | 64.8 | 3.2e-16 |
| Cation_ATPase_C 1. | 879 | 1061 | 204.3 | 3.3e-58 |
3. Sequence Information
Fasta Sequence: XSB2969.fasta
Amino Acid Sequence and Secondary Structures (PsiPred):
4. 3D Information
Not Available.
* Cleavage Information
1 [sites]
Cleavage sites (±10aa)
[Site 1] EIDHAERELR1101-RGQILWFRGL
Arg1101 
Arg
 |
|||||||||
| P10 | P9 | P8 | P7 | P6 | P5 | P4 | P3 | P2 | P1 |
|---|---|---|---|---|---|---|---|---|---|
| Glu1092 | Ile1093 | Asp1094 | His1095 | Ala1096 | Glu1097 | Arg1098 | Glu1099 | Leu1100 | Arg1101 |
 |
|||||||||
| P1' | P2' | P3' | P4' | P5' | P6' | P7' | P8' | P9' | P10' |
| Arg1102 | Gly1103 | Gln1104 | Ile1105 | Leu1106 | Trp1107 | Phe1108 | Arg1109 | Gly1110 | Leu1111 |
Sequence conservation (by blast)
* References
[PubMed ID: 15632090] Florea L, Di Francesco V, Miller J, Turner R, Yao A, Harris M, Walenz B, Mobarry C, Merkulov GV, Charlab R, Dew I, Deng Z, Istrail S, Li P, Sutton G, Gene and alternative splicing annotation with AIR. Genome Res. 2005 Jan;15(1):54-66.