CL0055 : calpain Rt88
[ CaMP Format ]
* Basic Information
| Organism | Rattus norvegicus (Norway rat) |
| Protein Names | calpain Rt88 [Rattus norvegicus]; Calpain Rt88 |
| Gene Names | Capn3 |
| Gene Locus | Not available |
| GO Function | Not available |
* Information From OMIM
Not Available.
* Structure Information
1. Primary Information
Length: 757 aa
Average Mass: 87.541 kDa
Monoisotopic Mass: 87.485 kDa
2. Domain Information
Annotated Domains: interpro / pfam / smart / prosite
Computationally Assigned Domains (Pfam+HMMER):
| domain name | begin | end | score | e-value |
|---|---|---|---|---|
| Cementoin 1. | 22 | 38 | 7.7 | 4 |
| Peptidase_C2 1. | 50 | 397 | 906.0 | 1.9e-269 |
| Calpain_III 1. | 408 | 562 | 370.9 | 2.3e-108 |
| efhand 1. | 589 | 616 | 0.6 | 18 |
| efhand 2. | 632 | 660 | 28.5 | 2.6e-05 |
| efhand 3. | 662 | 690 | 27.4 | 5.8e-05 |
| efhand 4. | 727 | 754 | 9.1 | 2.2 |
3. Sequence Information
Fasta Sequence: CL0055.fasta
Amino Acid Sequence and Secondary Structures (PsiPred):
4. 3D Information
Not Available.
* References
[PubMed ID: 11120559] Azuma M, Fukiage C, Higashine M, Nakajima T, Ma H, Shearer TR, Identification and characterization of a retina-specific calpain (Rt88) from rat. Curr Eye Res. 2000 Sep;21(3):710-20.