CL0212 : calpain-like protein
[ CaMP Format ]
* Basic Information
| Organism | Arabidopsis thaliana (thale cress) |
| Protein Names | calpain-like protein [Arabidopsis thaliana]; Calpain-like protein |
| Gene Names | At1g55350 |
| Gene Locus | Not available |
| GO Function | Not available |
| Entrez Protein | Entrez Nucleotide | Entrez Gene | UniProt | OMIM | HGNC | HPRD | KEGG |
|---|---|---|---|---|---|---|---|
| AAL38186 | N/A | N/A | Q8RVL2 | N/A | N/A | N/A | ath:AT1G55350 |
* Information From OMIM
Not Available.
* Structure Information
1. Primary Information
Length: 2151 aa
Average Mass: 238.264 kDa
Monoisotopic Mass: 238.113 kDa
2. Domain Information
Annotated Domains: interpro / pfam / smart / prosite
Computationally Assigned Domains (Pfam+HMMER):
| domain name | begin | end | score | e-value |
|---|---|---|---|---|
| VMA21 1. | 61 | 117 | -22.1 | 6.6 |
| DUF1290 1. | 127 | 186 | -80.5 | 6.9 |
| MrpF_PhaF 1. | 289 | 340 | -27.6 | 9.3 |
| IL2 1. | 458 | 609 | -20.4 | 6.1 |
| DUF1146 1. | 663 | 706 | -24.6 | 6.6 |
| DUF308 1. | 811 | 836 | 14.7 | 0.4 |
| DUF6 1. | 856 | 985 | -23.5 | 1.7 |
| DUF395 1. | 1042 | 1081 | -14.3 | 5.5 |
| Rrp15p 1. | 1265 | 1405 | -52.4 | 9 |
| PEGA 1. | 1500 | 1551 | -23.4 | 8.1 |
| Peptidase_C2 1. | 1696 | 1997 | 285.6 | 1.1e-82 |
| Calpain_III 1. | 1999 | 2149 | -9.8 | 3e-06 |
3. Sequence Information
Fasta Sequence: CL0212.fasta
Amino Acid Sequence and Secondary Structures (PsiPred):
4. 3D Information
Not Available.
* References
[PubMed ID: 11929961] Lid SE, Gruis D, Jung R, Lorentzen JA, Ananiev E, Chamberlin M, Niu X, Meeley R, Nichols S, Olsen OA, The defective kernel 1 (dek1) gene required for aleurone cell development in the endosperm of maize grains encodes a membrane protein of the calpain gene superfamily. Proc Natl Acad Sci U S A. 2002 Apr 16;99(8):5460-5. Epub 2002 Apr 2.