CL0216 : Dek1-calpain-like protein
[ CaMP Format ]
* Basic Information
| Organism | Oryza sativa (rice) |
| Protein Names | contains calpain domains II and III; Dek1-calpain-like protein [Oryza sativa] |
| Gene Names | Not available |
| Gene Locus | Not available |
| GO Function | Not available |
* Information From OMIM
Not Available.
* Structure Information
1. Primary Information
Length: 2162 aa
Average Mass: 239.877 kDa
Monoisotopic Mass: 239.723 kDa
2. Domain Information
Annotated Domains: interpro / pfam / smart / prosite
Computationally Assigned Domains (Pfam+HMMER):
| domain name | begin | end | score | e-value |
|---|---|---|---|---|
| VMA21 1. | 58 | 118 | -23.9 | 10 |
| DsbB 1. | 121 | 252 | -58.7 | 6.9 |
| DUF378 1. | 262 | 313 | -24.9 | 9.6 |
| PetN 1. | 721 | 749 | 3.5 | 5.2 |
| Fic 1. | 934 | 966 | -8.4 | 5.9 |
| DUF204 1. | 989 | 1071 | -34.5 | 6 |
| FeoB_C 1. | 1092 | 1135 | -21.2 | 9.7 |
| MraZ 1. | 1160 | 1237 | -19.0 | 7.4 |
| NUFIP1 1. | 1275 | 1323 | -10.8 | 6 |
| GHMP_kinases_N 1. | 1343 | 1413 | -6.6 | 1.6 |
| Laminin_G_2 1. | 1443 | 1568 | -25.8 | 6 |
| Peptidase_C2 1. | 1707 | 2008 | 275.5 | 1.2e-79 |
| Calpain_III 1. | 2013 | 2160 | 0.4 | 4.9e-07 |
3. Sequence Information
Fasta Sequence: CL0216.fasta
Amino Acid Sequence and Secondary Structures (PsiPred):
4. 3D Information
Not Available.
* References
[PubMed ID: 11929961] Lid SE, Gruis D, Jung R, Lorentzen JA, Ananiev E, Chamberlin M, Niu X, Meeley R, Nichols S, Olsen OA, The defective kernel 1 (dek1) gene required for aleurone cell development in the endosperm of maize grains encodes a membrane protein of the calpain gene superfamily. Proc Natl Acad Sci U S A. 2002 Apr 16;99(8):5460-5. Epub 2002 Apr 2.