CL0225 : phytocalpain
[ CaMP Format ]
* Basic Information
| Organism | Saccharum hybrid cultivar |
| Protein Names | phytocalpain [Saccharum hybrid cultivar]; Phytocalpain; 3.4.22.17 |
| Gene Names | Not available |
| Gene Locus | Not available |
| GO Function | Not available |
* Information From OMIM
Not Available.
* Structure Information
1. Primary Information
Length: 1160 aa
Average Mass: 129.367 kDa
Monoisotopic Mass: 129.285 kDa
2. Domain Information
Annotated Domains: interpro / pfam / smart / prosite
Computationally Assigned Domains (Pfam+HMMER):
| domain name | begin | end | score | e-value |
|---|---|---|---|---|
| DUF1600 1. | 14 | 116 | -44.7 | 4.9 |
| NUFIP1 1. | 275 | 318 | -5.2 | 1.2 |
| CFEM 1. | 399 | 451 | -29.2 | 6.4 |
| Spo0M 1. | 456 | 650 | -145.8 | 3.9 |
| Peptidase_C2 1. | 705 | 1006 | 268.0 | 2.2e-77 |
| Calpain_III 1. | 1011 | 1158 | 2.9 | 3.1e-07 |
3. Sequence Information
Fasta Sequence: CL0225.fasta
Amino Acid Sequence and Secondary Structures (PsiPred):
4. 3D Information
Not Available.
* References
[PubMed ID: 12597871] Margis R, Margis-Pinheiro M, Phytocalpains: orthologous calcium-dependent cysteine proteinases. Trends Plant Sci. 2003 Feb;8(2):58-62.