CL0238 : phytocalpain
[ CaMP Format ]
* Basic Information
| Organism | Nicotiana benthamiana |
| Protein Names | phytocalpain [Nicotiana benthamiana]; Phytocalpain |
| Gene Names | DEK |
| Gene Locus | Not available |
| GO Function | Not available |
* Information From OMIM
Not Available.
* Structure Information
1. Primary Information
Length: 2142 aa
Average Mass: 236.792 kDa
Monoisotopic Mass: 236.640 kDa
2. Domain Information
Annotated Domains: interpro / pfam / smart / prosite
Computationally Assigned Domains (Pfam+HMMER):
| domain name | begin | end | score | e-value |
|---|---|---|---|---|
| LHC 1. | 3 | 40 | -5.6 | 4 |
| MARVEL 1. | 45 | 152 | -39.0 | 6.9 |
| PsbL 1. | 218 | 254 | 3.3 | 8.9 |
| Lectin_legB 1. | 316 | 487 | -151.4 | 4.5 |
| Lys 1. | 508 | 604 | -80.9 | 9.4 |
| DUF1146 1. | 653 | 696 | -17.9 | 1.3 |
| PetN 1. | 700 | 728 | 3.3 | 5.5 |
| DUF308 1. | 802 | 827 | 13.9 | 0.69 |
| SKG6 1. | 917 | 956 | -9.4 | 9.1 |
| Bac_ATP_syn_I 1. | 964 | 1087 | -33.2 | 2.3 |
| RNA_Me_trans 1. | 1089 | 1248 | -101.5 | 8.8 |
| NUFIP1 1. | 1255 | 1300 | -8.0 | 2.7 |
| Dickkopf_N 1. | 1388 | 1438 | -23.7 | 5.9 |
| Peptidase_C2 1. | 1687 | 1988 | 296.8 | 4.5e-86 |
| Calpain_III 1. | 1993 | 2140 | -10.3 | 3.3e-06 |
3. Sequence Information
Fasta Sequence: CL0238.fasta
Amino Acid Sequence and Secondary Structures (PsiPred):
4. 3D Information
Not Available.
* References
[PubMed ID: 15165188] Ahn JW, Kim M, Lim JH, Kim GT, Pai HS, Phytocalpain controls the proliferation and differentiation fates of cells in plant organ development. Plant J. 2004 Jun;38(6):969-81.