CL0257 : calpain 1 catalytic subunit
[ CaMP Format ]
* Basic Information
| Organism | Oncorhynchus mykiss (rainbow trout) |
| Protein Names | calpain 1 catalytic subunit [Oncorhynchus mykiss]; Calpain 1 catalytic subunit |
| Gene Names | Capn1 |
| Gene Locus | Not available |
| GO Function | Not available |
* Information From OMIM
Not Available.
* Structure Information
1. Primary Information
Length: 704 aa
Average Mass: 79.924 kDa
Monoisotopic Mass: 79.874 kDa
2. Domain Information
Annotated Domains: interpro / pfam / smart / prosite
Computationally Assigned Domains (Pfam+HMMER):
| domain name | begin | end | score | e-value |
|---|---|---|---|---|
| G-patch 1. | 6 | 43 | -10.5 | 3.9 |
| Peptidase_C2 1. | 50 | 349 | 739.8 | 2.1e-219 |
| Calpain_III 1. | 360 | 512 | 342.0 | 1.1e-99 |
| efhand 1. | 579 | 607 | 24.7 | 0.00038 |
| efhand 2. | 609 | 637 | 19.4 | 0.014 |
| efhand 3. | 674 | 701 | 7.6 | 3.1 |
3. Sequence Information
Fasta Sequence: CL0257.fasta
Amino Acid Sequence and Secondary Structures (PsiPred):
4. 3D Information
Not Available.
* References
[PubMed ID: 15621511] Salem M, Nath J, Rexroad CE, Killefer J, Yao J, Identification and molecular characterization of the rainbow trout calpains (Capn1 and Capn2): their expression in muscle wasting during starvation. Comp Biochem Physiol B Biochem Mol Biol. 2005 Jan;140(1):63-71.