CL0629 : hypothetical protein
[ CaMP Format ]
* Basic Information
| Organism | Vitis vinifera |
| Protein Names | hypothetical protein [Vitis vinifera] |
| Gene Names | Not available |
| Gene Locus | Not available |
| GO Function | Not available |
| Entrez Protein | Entrez Nucleotide | Entrez Gene | UniProt | OMIM | HGNC | HPRD | KEGG |
|---|---|---|---|---|---|---|---|
| CAN78877 | N/A | N/A | N/A | N/A | N/A | N/A | N/A |
* Information From OMIM
Not Available.
* Structure Information
1. Primary Information
Length: 1508 aa
Average Mass: 168.028 kDa
Monoisotopic Mass: 167.920 kDa
2. Domain Information
Annotated Domains: Not Available.
Computationally Assigned Domains (Pfam+HMMER):
| domain name | begin | end | score | e-value |
|---|---|---|---|---|
| DUF378 1. | 19 | 85 | -22.4 | 5.6 |
| Melittin 1. | 175 | 200 | 8.0 | 1.5 |
| NS3_envE 1. | 323 | 407 | -17.3 | 7.1 |
| DHFR_2 1. | 508 | 578 | -10.4 | 2.4 |
| Herpes_capsid 1. | 613 | 772 | -76.4 | 5.9 |
| Pentaxin 1. | 790 | 968 | -110.9 | 4.2 |
| Peptidase_C2 1. | 1053 | 1354 | 283.9 | 3.6e-82 |
| Calpain_III 1. | 1359 | 1506 | 4.9 | 2.2e-07 |
3. Sequence Information
Fasta Sequence: CL0629.fasta
Amino Acid Sequence and Secondary Structures (PsiPred):
4. 3D Information
Not Available.
* References
[PubMed ID: 18094749] Velasco R, Zharkikh A, Troggio M, Cartwright DA, Cestaro A, Pruss D, Pindo M, Fitzgerald LM, Vezzulli S, Reid J, Malacarne G, Iliev D, Coppola G, Wardell B, Micheletti D, Macalma T, Facci M, Mitchell JT, Perazzolli M, Eldredge G, Gatto P, Oyzerski R, Moretto M, Gutin N, Stefanini M, Chen Y, Segala C, Davenport C, Dematte L, Mraz A, Battilana J, Stormo K, Costa F, Tao Q, Si-Ammour A, Harkins T, Lackey A, Perbost C, Taillon B, Stella A, Solovyev V, Fawcett JA, Sterck L, Vandepoele K, Grando SM, Toppo S, Moser C, Lanchbury J, Bogden R, Skolnick M, Sgaramella V, Bhatnagar SK, Fontana P, Gutin A, Van de Peer Y, Salamini F, Viola R, A high quality draft consensus sequence of the genome of a heterozygous grapevine variety. PLoS ONE. 2007 Dec 19;2(12):e1326.