CL0854 : CAPN1 protein
[ CaMP Format ]
* Basic Information
| Organism | Xenopus (Silurana) tropicalis (western clawed frog) |
| Protein Names | CAPN1 protein [Xenopus (Silurana) tropicalis] |
| Gene Names | CAPN1; CAPN1 protein |
| Gene Locus | Not available |
| GO Function | Not available |
| Entrez Protein | Entrez Nucleotide | Entrez Gene | UniProt | OMIM | HGNC | HPRD | KEGG |
|---|---|---|---|---|---|---|---|
| NP_001013632 | NM_001013614 | 541455 | Q66IH0 | N/A | N/A | N/A | xtr:541455 |
* Information From OMIM
Not Available.
* Structure Information
1. Primary Information
Length: 713 aa
Average Mass: 80.969 kDa
Monoisotopic Mass: 80.917 kDa
2. Domain Information
Annotated Domains: interpro / pfam / smart / prosite
Computationally Assigned Domains (Pfam+HMMER):
| domain name | begin | end | score | e-value |
|---|---|---|---|---|
| Peptidase_C2 1. | 55 | 354 | 751.9 | 4.7e-223 |
| Calpain_III 1. | 365 | 521 | 350.7 | 2.8e-102 |
| efhand 1. | 545 | 572 | 2.6 | 11 |
| efhand 2. | 588 | 616 | 19.5 | 0.014 |
| efhand 3. | 618 | 646 | 16.8 | 0.09 |
| efhand 4. | 683 | 711 | 2.6 | 11 |
3. Sequence Information
Fasta Sequence: CL0854.fasta
Amino Acid Sequence and Secondary Structures (PsiPred):
4. 3D Information
Not Available.
* References
[PubMed ID: 12454917] Klein SL, Strausberg RL, Wagner L, Pontius J, Clifton SW, Richardson P, Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Dev Dyn. 2002 Dec;225(4):384-91.