CL0963 : calpain 1
[ CaMP Format ]
* Basic Information
| Organism | Gallus gallus (chicken) |
| Protein Names | large subunit; calpain 1, large subunit [Gallus gallus]; Calpain-1 catalytic subunit; 3.4.22.52; Calpain-1 large subunit; Calcium-activated neutral proteinase; CANP; Mu/M-type |
| Gene Names | CAPN1; calpain 1, (mu/I) large subunit |
| Gene Locus | 3; chromosome 3 |
| GO Function | Not available |
| Entrez Protein | Entrez Nucleotide | Entrez Gene | UniProt | OMIM | HGNC | HPRD | KEGG |
|---|---|---|---|---|---|---|---|
| NP_990634 | NM_205303 | 396240 | P00789 | N/A | N/A | N/A | gga:396240 |
* Information From OMIM
Not Available.
* Structure Information
1. Primary Information
Length: 705 aa
Average Mass: 80.352 kDa
Monoisotopic Mass: 80.300 kDa
2. Domain Information
Annotated Domains: interpro / pfam / smart / prosite
Computationally Assigned Domains (Pfam+HMMER):
| domain name | begin | end | score | e-value |
|---|---|---|---|---|
| Peptidase_C2 1. | 48 | 347 | 820.1 | 1.4e-243 |
| Calpain_III 1. | 358 | 513 | 394.7 | 1.6e-115 |
| efhand 1. | 580 | 608 | 12.3 | 0.96 |
| efhand 2. | 610 | 638 | 19.9 | 0.01 |
3. Sequence Information
Fasta Sequence: CL0963.fasta
Amino Acid Sequence and Secondary Structures (PsiPred):
4. 3D Information
Not Available.
* References
[PubMed ID: 18727211] Zhang ZR, Liu YP, Jiang X, Du HR, Zhu Q, Study on association of single nucleotide polymorphism of CAPN1 gene with muscle fibre and carcass traits in quality chicken populations. J Anim Breed Genet. 2008 Aug;125(4):258-64.