logo CaMPDB: Calpain for Modulatory Proteolysis Database

XSB0049 : PREDICTED: similar to Actin, cytoplasmic 2 (Gamma-actin) [Rattus norvegicus]

[ CaMP Format ]

This entry is computationally expanded from SB0031

* Basic Information

OrganismRattus norvegicus (Norway rat)
Protein Namessimilar to Actin; cytoplasmic 2 (Gamma-actin)
Gene NamesLOC295810; Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 27 mRNAs, 2600 ESTs, 72 Proteins
Gene LocusNot available
GO FunctionNot available
Entrez Protein Entrez Nucleotide Entrez Gene UniProt OMIM HGNC HPRD KEGG
XP_001081785 XM_001081785 295810 N/A N/A N/A N/A N/A

* Information From OMIM

Not Available.

* Structure Information

1. Primary Information

Length: 536 aa

Average Mass: 58.801 kDa

Monoisotopic Mass: 58.763 kDa

2. Domain Information

Annotated Domains: Not Available.

Computationally Assigned Domains (Pfam+HMMER):

domain namebeginendscoree-value
Auxin_repressed 1. 29139-38.87.4
Actin 1. 163536831.16.6e-247
--- cleavage 198 (inside Actin 163..536) ---

3. Sequence Information

Fasta Sequence: XSB0049.fasta

Amino Acid Sequence and Secondary Structures (PsiPred):

4. 3D Information

Not Available.

* Cleavage Information

1 [sites]

Cleavage sites (±10aa)

[Site 1] RAVFPSIVGR198-PRHQGVMVGM

Arg198 Pro

P10 P9 P8 P7 P6 P5 P4 P3 P2 P1
Arg189Ala190Val191Phe192Pro193Ser194Ile195Val196Gly197Arg198
P1' P2' P3' P4' P5' P6' P7' P8' P9' P10'
Pro199Arg200His201Gln202Gly203Val204Met205Val206Gly207Met208

Sequence conservation (by blast)

* References

None.