XSB0248 : unnamed protein product [Mus musculus]
[ CaMP Format ]
This entry is computationally expanded from SB0001
* Basic Information
| Organism | Mus musculus (house mouse) |
| Protein Names | Putative uncharacterized protein |
| Gene Names | Capn2 |
| Gene Locus | Not available |
| GO Function | Not available |
* Information From OMIM
Not Available.
* Structure Information
1. Primary Information
Length: 530 aa
Average Mass: 59.929 kDa
Monoisotopic Mass: 59.892 kDa
2. Domain Information
Annotated Domains: interpro / pfam / smart / prosite
Computationally Assigned Domains (Pfam+HMMER):
| domain name | begin | end | score | e-value |
|---|---|---|---|---|
| --- cleavage 19 --- | ||||
| --- cleavage 9 --- | ||||
| Peptidase_C2 1. | 45 | 344 | 810.8 | 8.5e-241 |
| Osmo_CC 1. | 373 | 416 | 2.3 | 7.8 |
| efhand 1. | 447 | 475 | 20.4 | 0.0074 |
3. Sequence Information
Fasta Sequence: XSB0248.fasta
Amino Acid Sequence and Secondary Structures (PsiPred):
4. 3D Information
Not Available.
* Cleavage Information
2 [sites]
Cleavage sites (±10aa)
[Site 1] KDREAAEGLG19-SHERAIKYLN
Gly19 
Ser
 |
|||||||||
| P10 | P9 | P8 | P7 | P6 | P5 | P4 | P3 | P2 | P1 |
|---|---|---|---|---|---|---|---|---|---|
| Lys10 | Asp11 | Arg12 | Glu13 | Ala14 | Ala15 | Glu16 | Gly17 | Leu18 | Gly19 |
 |
|||||||||
| P1' | P2' | P3' | P4' | P5' | P6' | P7' | P8' | P9' | P10' |
| Ser20 | His21 | Glu22 | Arg23 | Ala24 | Ile25 | Lys26 | Tyr27 | Leu28 | Asn29 |
Sequence conservation (by blast)
Sequence conservation (by blast)
| Reference peptide (cleaved bond±30 residues) |
|---|
| MAGIAIKLAKDREAAEGLGSHERAIKYLNQDYETLRNECLEAGALFQDP |
Summary
| # | organism | max score | hits | top seq |
|---|---|---|---|---|
| 1 | Mus musculus | 100.00 | 20 | unnamed protein product |
| 2 | N/A | 100.00 | 14 | C |
| 3 | Rattus norvegicus | 99.80 | 9 | calpain 2 |
| 4 | Homo sapiens | 95.50 | 25 | Unknown (protein for IMAGE:3637421) |
| 5 | catalytic | 95.50 | 1 | Calpain 2, large |
| 6 | Macaca mulatta | 94.00 | 3 | PREDICTED: calpain 2, large subunit |
| 7 | Bos taurus | 92.40 | 7 | Unknown (protein for MGC:138930) |
| 8 | Monodelphis domestica | 80.10 | 2 | PREDICTED: similar to calpain 2 |
| 9 | Xenopus laevis | 69.70 | 10 | hypothetical protein LOC399075 |
| 10 | Gallus gallus | 68.90 | 5 | calpain 1, (mu/I) large subunit |
| 11 | Coturnix coturnix | 68.20 | 1 | quail calpain |
| 12 | Xenopus tropicalis | 67.80 | 6 | calpain 2, (m/II) large subunit |
| 13 | Canis familiaris | 67.40 | 6 | PREDICTED: similar to calpain 8 |
| 14 | Danio rerio | 64.30 | 31 | PREDICTED: hypothetical protein |
| 15 | Tetraodon nigroviridis | 60.10 | 7 | unnamed protein product |
| 16 | Oncorhynchus mykiss | 60.10 | 3 | m-calpain |
| 17 | Pan troglodytes | 59.70 | 6 | PREDICTED: similar to calpain, partial |
| 18 | Stizostedion vitreum vitreum | 59.70 | 1 | putative calpain-like protein |
| 19 | Pongo pygmaeus | 55.80 | 1 | CAN1_PONPY Calpain-1 catalytic subunit (Calpain-1 |
| 20 | synthetic construct | 55.80 | 1 | Homo sapiens calpain 1, (mu/I) large subunit |
| 21 | Sus scrofa | 55.10 | 3 | micromolar calcium-activated neutral protease 1 is |
| 22 | Macaca fascicularis | 40.80 | 1 | unnamed protein product |
| 23 | Bos grunniens | 35.40 | 1 | micromolar calcium-activated neutral protease 1 la |
| 24 | Drosophila melanogaster | 35.00 | 6 | Calpain, without calmodulin-like domain |
| 25 | Aedes aegypti | 35.00 | 1 | calpain, putative |
| 26 | Oryctolagus cuniculus | 34.70 | 1 | calpain 3, (p94) |
Top-ranked sequences
| organism | matching |
|---|---|
| Mus musculus | Query 1 MAGIAIKLAKDREAAEGLG#SHERAIKYLNQDYETLRNECLEAGALFQDP 49 |||||||||||||||||||#|||||||||||||||||||||||||||||| Query 1 MAGIAIKLAKDREAAEGLG#SHERAIKYLNQDYETLRNECLEAGALFQDP 49 |
| N/A | Query 1 MAGIAIKLAKDREAAEGLG#SHERAIKYLNQDYETLRNECLEAGALFQDP 49 |||||||||||||||||||#|||||||||||||||||||||||||||||| Query 1 MAGIAIKLAKDREAAEGLG#SHERAIKYLNQDYETLRNECLEAGALFQDP 49 |
| Rattus norvegicus | Query 1 MAGIAIKLAKDREAAEGLG#SHERAIKYLNQDYETLRNECLEAGALFQDP 49 |||||+|||||||||||||#|||||||||||||||||||||||||||||| Sbjct 1 MAGIAMKLAKDREAAEGLG#SHERAIKYLNQDYETLRNECLEAGALFQDP 49 |
| Homo sapiens | Query 1 MAGIAIKLAKDREAAEGLG#SHERAIKYLNQDYETLRNECLEAGALFQDP 49 ||||| |||||||||||||#|||||||||||||| ||||||||| ||||| Sbjct 1 MAGIAAKLAKDREAAEGLG#SHERAIKYLNQDYEALRNECLEAGTLFQDP 49 |
| catalytic | Query 1 MAGIAIKLAKDREAAEGLG#SHERAIKYLNQDYETLRNECLEAGALFQDP 49 ||||| |||||||||||||#|||||||||||||| ||||||||| ||||| Sbjct 30 MAGIAAKLAKDREAAEGLG#SHERAIKYLNQDYEALRNECLEAGTLFQDP 78 |
| Macaca mulatta | Query 1 MAGIAIKLAKDREAAEGLG#SHERAIKYLNQDYETLRNECLEAGALFQDP 49 ||||| || ||||||||||#|||||||||||||| ||||||||| ||||| Sbjct 1 MAGIAAKLVKDREAAEGLG#SHERAIKYLNQDYEALRNECLEAGTLFQDP 49 |
| Bos taurus | Query 1 MAGIAIKLAKDREAAEGLG#SHERAIKYLNQDYETLRNECLEAGALFQDP 49 ||||| |||||||||||||#|||||+||||||| ||+|||||||||||| Sbjct 1 MAGIAAKLAKDREAAEGLG#SHERAVKYLNQDYAALRDECLEAGALFQDP 49 |
| Monodelphis domestica | Query 1 MAGIAIKLAKDREAAEGLG#SHERAIKYLNQDYETLRNECLEAGALFQDP 49 |+||| |+ +||||| |||#+||+|+|||||||||| +|||| | ||||| Sbjct 1 MSGIAAKVVRDREAAAGLG#THEQAVKYLNQDYETLLSECLEEGKLFQDP 49 |
| Xenopus laevis | Query 1 MAGIAIKLAKDREAAEGLG#SHERAIKYLNQDYETLRNECLEAGALFQDP 49 |+|+| +|||+| | | |#++|+|+ |||||+| ||||||++|+||+|| Sbjct 1 MSGVADRLAKERARASGFG#TNEKALPYLNQDFEALRNECLQSGSLFKDP 49 |
| Gallus gallus | Query 3 GIAIKLAKDREAAEGLG#SHERAIKYLNQDYETLRNECLEAGALFQDP 49 ||| +| +|| |||+|# | |+|||||||| |+ ||+|+| ||+|| Sbjct 6 GIAARLQRDRLRAEGVG#EHNNAVKYLNQDYEALKQECIESGTLFRDP 52 |
| Coturnix coturnix | Query 3 GIAIKLAKDREAAEGLG#SHERAIKYLNQDYETLRNECLEAGALFQDP 49 ||| +| +|| |||+|# | |+|||||||| |+ |+|+||||+|| Sbjct 6 GIAARLQRDRLRAEGVG#EHNNAVKYLNQDYEALKQACIESGALFRDP 52 |
| Xenopus tropicalis | Query 1 MAGIAIKLAKDREAAEGLG#SHERAIKYLNQDYETLRNECLEAGALFQD 48 |+|+| +|||+| | |||#++|+|+ ||+|||| ||||||++| ||+| Sbjct 1 MSGVADRLAKERALASGLG#TNEKALPYLSQDYEALRNECLQSGTLFKD 48 |
| Canis familiaris | Query 1 MAGIAIKLAKDREAAEGLG#SHERAIKYLNQDYETLRNECLEAGALFQDP 49 |+ +| ++|| + || |||#||++|+||| ||+| || +||+|| ||+|| Sbjct 94 MSALAARIAKQQAAAGGLG#SHQKAVKYLGQDFEKLRQQCLDAGVLFKDP 142 |
| Danio rerio | Query 1 MAGIAIKLAKDREAAEGLG#SHERAIKYLNQDYETLRNECLEAGALFQD 48 |+||| || |+| | |+|#++ +| |+|||||| |+ ||||+| |||| Sbjct 1 MSGIATKLQKNRARAAGIG#TNAQAAKFLNQDYEALKRECLESGRLFQD 48 |
| Tetraodon nigroviridis | Query 1 MAGIAIKLAKDREAAEGLG#SHERAIKYLNQDYETLRNECLEAGALFQD 48 |+||| || |+ |+| |#+ +| ||||||+|+|| ||| | |||| Sbjct 1 MSGIAAKLQHHRDRAQGFG#TASQAQKYLNQDFESLRESCLERGELFQD 48 |
| Oncorhynchus mykiss | Query 1 MAGIAIKLAKDREAAEGLG#SHERAIKYLNQDYETLRNECLEAGALFQDP 49 |+|+| ||| | | | |#++ |+||||||+| || +|| | || || Sbjct 1 MSGMASNLAKKRALAAGFG#TNANAVKYLNQDFEALRAQCLNRGGLFSDP 49 |
| Pan troglodytes | Query 1 MAGIAIKLAKDREAAEGLG#SHERAIKYLNQDYETLRNECLEAGALFQDP 49 || | +++ | | +|||#|++ |+||| ||++||| +||++| ||+|| Sbjct 1 MAAQAAGVSRQRAATQGLG#SNQNALKYLGQDFKTLRQQCLDSGVLFKDP 49 |
| Stizostedion vitreum vitreum | Query 1 MAGIAIKLAKDREAAEGLG#SHERAIKYLNQDYETLRNECLEAGALFQD 48 |+||| | + || +|+|#| +|+|||||||| || |||+ +||+| Sbjct 1 MSGIAATLQRRREKEQGIG#SCSQAVKYLNQDYEALRRRCLESESLFKD 48 |
| Pongo pygmaeus | Query 3 GIAIKLAKDREAAEGLG#SHERAIKYLNQDYETLRNECLEAGALFQD 48 |++ ++ | | |||# || ||||| |||| || ||++| ||+| Sbjct 13 GVSAQVQKQRARELGLG#RHENAIKYLGQDYEQLRVRCLQSGTLFRD 58 |
| synthetic construct | Query 3 GIAIKLAKDREAAEGLG#SHERAIKYLNQDYETLRNECLEAGALFQD 48 |++ ++ | | |||# || ||||| |||| || ||++| ||+| Sbjct 13 GVSAQVQKQRARELGLG#RHENAIKYLGQDYEQLRVRCLQSGTLFRD 58 |
| Sus scrofa | Query 3 GIAIKLAKDREAAEGLG#SHERAIKYLNQDYETLRNECLEAGALFQD 48 |++ ++ | | |||# || ||||| |||| || ||++|+||+| Sbjct 13 GVSAQVQKLRAKELGLG#RHENAIKYLGQDYEQLRAHCLQSGSLFRD 58 |
| Macaca fascicularis | Query 3 GIAIKLAKDREAAEGLG#SHERAIKYLNQDYETLRNECLEAGALFQDP 49 |+ + | | |+|# | | + || +| || || | ||+|| Sbjct 36 GMVAHINYSRLKASGVG#QHHNAHNFGNQSFEELRAVCLRKGELFEDP 82 |
| Bos grunniens | Query 27 YLNQDYETLRNECLEAGALFQD 48 || |||| || ||+ ||||+| Sbjct 1 YLGQDYEQLRVHCLQRGALFRD 22 |
| Drosophila melanogaster | Query 30 QDYETLRNECLEAGALFQDP 49 |||||+ | || +|+||+|| Sbjct 73 QDYETILNSCLASGSLFEDP 92 |
| Aedes aegypti | Query 30 QDYETLRNECLEAGALFQDP 49 ||| ||++|||+|+||+|| Sbjct 115 QDYYVLRSQCLESGSLFEDP 134 |
| Oryctolagus cuniculus | Query 7 KLAKDREAAEGLG#SHERAIKYLNQDYETLRNECLEAGALFQD 48 ++ ++|+ | |#+ + ||| ||+ || || ||+| Sbjct 12 RVIRERDRRNGEG#TVTQPIKYEGQDFVVLRQRCLAQKCLFED 53 |
[Site 2] MAGIAIKLA9-KDREAAEGLG
Ala9 Lys
|
|||||||||
| P10 | P9 | P8 | P7 | P6 | P5 | P4 | P3 | P2 | P1 |
|---|---|---|---|---|---|---|---|---|---|
| - | Met1 | Ala2 | Gly3 | Ile4 | Ala5 | Ile6 | Lys7 | Leu8 | Ala9 |
|
|||||||||
| P1' | P2' | P3' | P4' | P5' | P6' | P7' | P8' | P9' | P10' |
| Lys10 | Asp11 | Arg12 | Glu13 | Ala14 | Ala15 | Glu16 | Gly17 | Leu18 | Gly19 |
Sequence conservation (by blast) Sequence conservation (by blast)
| Reference peptide (cleaved bond±30 residues) |
|---|
| MAGIAIKLAKDREAAEGLGSHERAIKYLNQDYETLRNEC |
Summary
| # | organism | max score | hits | top seq |
|---|---|---|---|---|
| 1 | Mus musculus | 81.30 | 15 | unnamed protein product |
| 2 | N/A | 81.30 | 12 | C |
| 3 | Rattus norvegicus | 80.10 | 5 | calpain 2 |
| 4 | Homo sapiens | 77.40 | 17 | Unknown (protein for IMAGE:3637421) |
| 5 | catalytic | 77.40 | 1 | Calpain 2, large |
| 6 | Macaca mulatta | 75.90 | 3 | PREDICTED: calpain 2, large subunit |
| 7 | Bos taurus | 72.80 | 6 | Unknown (protein for MGC:138930) |
| 8 | Monodelphis domestica | 64.30 | 2 | PREDICTED: similar to calpain 2 |
| 9 | Xenopus tropicalis | 56.20 | 5 | calpain 2, (m/II) large subunit |
| 10 | Xenopus laevis | 55.10 | 9 | hypothetical protein LOC399075 |
| 11 | Gallus gallus | 54.70 | 5 | PREDICTED: similar to calpain 8 (nCL-2) |
| 12 | Canis familiaris | 52.00 | 3 | PREDICTED: similar to calpain 8 |
| 13 | Coturnix coturnix | 52.00 | 1 | quail calpain |
| 14 | Danio rerio | 50.80 | 23 | hypothetical protein LOC541374 |
| 15 | Oncorhynchus mykiss | 50.10 | 3 | calpain 2 catalytic subunit |
| 16 | Stizostedion vitreum vitreum | 49.70 | 1 | putative calpain-like protein |
| 17 | Tetraodon nigroviridis | 47.00 | 6 | unnamed protein product |
| 18 | Pan troglodytes | 45.40 | 5 | PREDICTED: similar to calpain, partial |
| 19 | Pongo pygmaeus | 44.30 | 1 | CAN1_PONPY Calpain-1 catalytic subunit (Calpain-1 |
| 20 | synthetic construct | 44.30 | 1 | Homo sapiens calpain 1, (mu/I) large subunit |
| 21 | Sus scrofa | 43.10 | 2 | micromolar calcium-activated neutral protease 1 is |
Top-ranked sequences
| organism | matching |
|---|---|
| Mus musculus | Query 1 MAGIAIKLA#KDREAAEGLGSHERAIKYLNQDYETLRNEC 39 |||||||||#|||||||||||||||||||||||||||||| Query 1 MAGIAIKLA#KDREAAEGLGSHERAIKYLNQDYETLRNEC 39 |
| N/A | Query 1 MAGIAIKLA#KDREAAEGLGSHERAIKYLNQDYETLRNEC 39 |||||||||#|||||||||||||||||||||||||||||| Query 1 MAGIAIKLA#KDREAAEGLGSHERAIKYLNQDYETLRNEC 39 |
| Rattus norvegicus | Query 1 MAGIAIKLA#KDREAAEGLGSHERAIKYLNQDYETLRNEC 39 |||||+|||#|||||||||||||||||||||||||||||| Sbjct 1 MAGIAMKLA#KDREAAEGLGSHERAIKYLNQDYETLRNEC 39 |
| Homo sapiens | Query 1 MAGIAIKLA#KDREAAEGLGSHERAIKYLNQDYETLRNEC 39 ||||| |||#|||||||||||||||||||||||| ||||| Sbjct 1 MAGIAAKLA#KDREAAEGLGSHERAIKYLNQDYEALRNEC 39 |
| catalytic | Query 1 MAGIAIKLA#KDREAAEGLGSHERAIKYLNQDYETLRNEC 39 ||||| |||#|||||||||||||||||||||||| ||||| Sbjct 30 MAGIAAKLA#KDREAAEGLGSHERAIKYLNQDYEALRNEC 68 |
| Macaca mulatta | Query 1 MAGIAIKLA#KDREAAEGLGSHERAIKYLNQDYETLRNEC 39 ||||| || #|||||||||||||||||||||||| ||||| Sbjct 1 MAGIAAKLV#KDREAAEGLGSHERAIKYLNQDYEALRNEC 39 |
| Bos taurus | Query 1 MAGIAIKLA#KDREAAEGLGSHERAIKYLNQDYETLRNEC 39 ||||| |||#|||||||||||||||+||||||| ||+|| Sbjct 1 MAGIAAKLA#KDREAAEGLGSHERAVKYLNQDYAALRDEC 39 |
| Monodelphis domestica | Query 1 MAGIAIKLA#KDREAAEGLGSHERAIKYLNQDYETLRNEC 39 |+||| |+ #+||||| |||+||+|+|||||||||| +|| Sbjct 1 MSGIAAKVV#RDREAAAGLGTHEQAVKYLNQDYETLLSEC 39 |
| Xenopus tropicalis | Query 1 MAGIAIKLA#KDREAAEGLGSHERAIKYLNQDYETLRNEC 39 |+|+| +||#|+| | |||++|+|+ ||+|||| ||||| Sbjct 1 MSGVADRLA#KERALASGLGTNEKALPYLSQDYEALRNEC 39 |
| Xenopus laevis | Query 1 MAGIAIKLA#KDREAAEGLGSHERAIKYLNQDYETLRNEC 39 |+|+| +||#|+| | | |++|+|+ |||||+| ||||| Sbjct 1 MSGVADRLA#KERARASGFGTNEKALPYLNQDFEALRNEC 39 |
| Gallus gallus | Query 1 MAGIAIKLA#KDREAAEGLGSHERAIKYLNQDYETLRNEC 39 |||+| +| #++| |||||||+ +|| || |||| || | Sbjct 1 MAGLAARLC#QERAAAEGLGSYRKAISYLGQDYEALRQRC 39 |
| Canis familiaris | Query 1 MAGIAIKLA#KDREAAEGLGSHERAIKYLNQDYETLRNEC 39 |+ +| ++|#| + || |||||++|+||| ||+| || +| Sbjct 94 MSALAARIA#KQQAAAGGLGSHQKAVKYLGQDFEKLRQQC 132 |
| Coturnix coturnix | Query 3 GIAIKLA#KDREAAEGLGSHERAIKYLNQDYETLRNEC 39 ||| +| #+|| |||+| | |+|||||||| |+ | Sbjct 6 GIAARLQ#RDRLRAEGVGEHNNAVKYLNQDYEALKQAC 42 |
| Danio rerio | Query 1 MAGIAIKLA#KDREAAEGLGSHERAIKYLNQDYETLRNEC 39 |+|+| ||#| | | | |++ |+|||||++||||+|| Sbjct 1 MSGVASTLA#KKRALAAGFGTNSNAVKYLNQNFETLRSEC 39 |
| Oncorhynchus mykiss | Query 1 MAGIAIKLA#KDREAAEGLGSHERAIKYLNQDYETLRNEC 39 |||+| ||#| | | | |++ | ||||||+|+||+|| Sbjct 1 MAGVASTLA#KKRALAAGFGTNANASKYLNQDFESLRSEC 39 |
| Stizostedion vitreum vitreum | Query 1 MAGIAIKLA#KDREAAEGLGSHERAIKYLNQDYETLRNEC 39 |+||| | #+ || +|+|| +|+|||||||| || | Sbjct 1 MSGIAATLQ#RRREKEQGIGSCSQAVKYLNQDYEALRRRC 39 |
| Tetraodon nigroviridis | Query 1 MAGIAIKLA#KDREAAEGLGSHERAIKYLNQDYETLRNEC 39 |+||| || # |+ |+| |+ +| ||||||+|+|| | Sbjct 1 MSGIAAKLQ#HHRDRAQGFGTASQAQKYLNQDFESLRESC 39 |
| Pan troglodytes | Query 1 MAGIAIKLA#KDREAAEGLGSHERAIKYLNQDYETLRNEC 39 || | ++#+ | | +||||++ |+||| ||++||| +| Sbjct 1 MAAQAAGVS#RQRAATQGLGSNQNALKYLGQDFKTLRQQC 39 |
| Pongo pygmaeus | Query 3 GIAIKLA#KDREAAEGLGSHERAIKYLNQDYETLRNEC 39 |++ ++ #| | ||| || ||||| |||| || | Sbjct 13 GVSAQVQ#KQRARELGLGRHENAIKYLGQDYEQLRVRC 49 |
| synthetic construct | Query 3 GIAIKLA#KDREAAEGLGSHERAIKYLNQDYETLRNEC 39 |++ ++ #| | ||| || ||||| |||| || | Sbjct 13 GVSAQVQ#KQRARELGLGRHENAIKYLGQDYEQLRVRC 49 |
| Sus scrofa | Query 3 GIAIKLA#KDREAAEGLGSHERAIKYLNQDYETLRNEC 39 |++ ++ #| | ||| || ||||| |||| || | Sbjct 13 GVSAQVQ#KLRAKELGLGRHENAIKYLGQDYEQLRAHC 49 |
* References
[PubMed ID: 10349636] Carninci P, Hayashizaki Y, High-efficiency full-length cDNA cloning. Methods Enzymol. 1999;303:19-44.
[PubMed ID: 11042159] ... Carninci P, Shibata Y, Hayatsu N, Sugahara Y, Shibata K, Itoh M, Konno H, Okazaki Y, Muramatsu M, Hayashizaki Y, Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes. Genome Res. 2000 Oct;10(10):1617-30.
[PubMed ID: 11076861] ... Shibata K, Itoh M, Aizawa K, Nagaoka S, Sasaki N, Carninci P, Konno H, Akiyama J, Nishi K, Kitsunai T, Tashiro H, Itoh M, Sumi N, Ishii Y, Nakamura S, Hazama M, Nishine T, Harada A, Yamamoto R, Matsumoto H, Sakaguchi S, Ikegami T, Kashiwagi K, Fujiwake S, Inoue K, Togawa Y, RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Genome Res. 2000 Nov;10(11):1757-71.
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