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XSB0249 : unnamed protein product [Mus musculus]

[ CaMP Format ]

This entry is computationally expanded from SB0022

* Basic Information

OrganismMus musculus (house mouse)
Protein NamesPutative uncharacterized protein
Gene NamesCttn
Gene LocusNot available
GO FunctionNot available
Entrez Protein Entrez Nucleotide Entrez Gene UniProt OMIM HGNC HPRD KEGG
BAC39148 N/A N/A Q8BNA5 N/A N/A N/A mmu:

* Information From OMIM

Not Available.

* Structure Information

1. Primary Information

Length: 509 aa

Average Mass: 57.116 kDa

Monoisotopic Mass: 57.081 kDa

2. Domain Information

Annotated Domains: interpro / pfam / smart / prosite

Computationally Assigned Domains (Pfam+HMMER):

domain namebeginendscoree-value
HS1_rep 1. 8311967.07.3e-17
HS1_rep 2. 12015672.71.3e-18
HS1_rep 3. 15719374.73.4e-19
HS1_rep 4. 19423069.99.2e-18
HS1_rep 5. 23126771.72.8e-18
HS1_rep 6. 26830426.60.0001
--- cleavage 299 (inside HS1_rep 268..304) ---
--- cleavage 321 ---
--- cleavage 314 ---
SH3_1 1. 45450889.89.6e-24

3. Sequence Information

Fasta Sequence: XSB0249.fasta

Amino Acid Sequence and Secondary Structures (PsiPred):

4. 3D Information

Not Available.

* Cleavage Information

3 [sites]

Cleavage sites (±10aa)

[Site 1] VVQVPSAYQK299-TVPIEAVTSK

Lys299 Thr

P10 P9 P8 P7 P6 P5 P4 P3 P2 P1
Val290Val291Gln292Val293Pro294Ser295Ala296Tyr297Gln298Lys299
P1' P2' P3' P4' P5' P6' P7' P8' P9' P10'
Thr300Val301Pro302Ile303Glu304Ala305Val306Thr307Ser308Lys309

Sequence conservation (by blast)

[Site 2] NIRANFENLA321-KEREQEDRRK

Ala321 Lys

P10 P9 P8 P7 P6 P5 P4 P3 P2 P1
Asn312Ile313Arg314Ala315Asn316Phe317Glu318Asn319Leu320Ala321
P1' P2' P3' P4' P5' P6' P7' P8' P9' P10'
Lys322Glu323Arg324Glu325Gln326Glu327Asp328Arg329Arg330Lys331

Sequence conservation (by blast)

[Site 3] AVTSKTSNIR314-ANFENLAKER

Arg314 Ala

P10 P9 P8 P7 P6 P5 P4 P3 P2 P1
Ala305Val306Thr307Ser308Lys309Thr310Ser311Asn312Ile313Arg314
P1' P2' P3' P4' P5' P6' P7' P8' P9' P10'
Ala315Asn316Phe317Glu318Asn319Leu320Ala321Lys322Glu323Arg324

Sequence conservation (by blast)

* References

[PubMed ID: 10349636] Carninci P, Hayashizaki Y, High-efficiency full-length cDNA cloning. Methods Enzymol. 1999;303:19-44.

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